Styela clava (leathery sea squirt): 120346937
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Entry
120346937 CDS
T07291
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03430
Mismatch repair
sclv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120346937
03460 Fanconi anemia pathway
120346937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120346937
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120346937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120346937
NCBI-ProteinID:
XP_039272664
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MSSSERQPVIRKLDEDVVNRIAAGEVIQRPANALKEMLENSLDAGSTSITVTIKVGGLKM
LQISDNGHGIRKEDMGIVCERFTTSKLKEFSDLRSIATFGFRGEALASISHVSHLTICTR
TKESKCAYKASYIDGKVKDPPRPTAGNVGTQITVEDLFYNVPIRRKALNNASEEHQRIAD
VISKYAIHNSGIGFTLRKITEGNNAGNDVSVRTQSGSSIADNIGLIYGSYIAKELLHVNH
TDESLKYKMSGWLTNANCSMKKFNFLLFINQRLVDCTSLKRALDSVYQTFLPKGSHPFVY
MSLEISPANIDVNVHPTKHEVHFLHEEEIIESVQKAVEMRLRDCNHSRSFYTQTLLPTSS
NISTQEIVKQKATTELPHSSKVYDHQMVRTDSKLQKLDAFLNVFSSETQENKDPSKVSTS
NVTTMKKTSENINSGAKVLKMSVPKQEKSDNATKDNLTSTSFPKRRQIKLTSVLTLQEEI
RQNAHSDLVKIMSDHTWVGCIDPELALIQHGTKLYLTNTTRLSEELFYQIMIYDFGNFGI
FRLSEPAPTIELVKLALDDEESGWKPADGNKSDLANHIVEFLKDKADMLSDYFSFEVDGN
GNITGIPMLLKDYIPSMEGLPMFVLRLTTEVDWESEIDCFKTFCRECARFYSVRKGFIDL
LEIIKDAKLDDECEMLDSSFSATDSTSNPPAGTNSSNKSGSWKWTIEHIVYRAFQKILLP
DKSMLEDGTFLQLANLPDLYKVFERC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttctgagagacaaccagtgataagaaaacttgacgaggatgttgttaatcga
attgctgctggtgaagtcattcagagacctgcaaatgcgttgaaagaaatgttggagaat
agtttagatgctggttcaacttccatcacagtcacaattaaagttggtgggttaaaaatg
cttcagatatctgataatggtcacggaattcgaaaagaagacatgggaattgtatgtgag
agatttaccacaagtaagttgaaagaattcagcgaccttcgctctattgcaacatttggc
tttcgtggtgaagcactcgctagcattagccatgtttctcatctcactatatgcacgaga
acgaaggaaagtaaatgcgcttacaaagcttcatatattgacggaaaagtgaaagaccct
ccacgaccaactgcaggaaatgttggaacccagattactgttgaagacctcttttataat
gttcctattaggagaaaggcattaaacaatgcatcggaagaacaccagagaattgcagat
gtcatcagcaaatatgccattcacaattctggaattggattcacgttgcgtaaaattaca
gaaggtaacaatgctggaaatgatgttagtgttcgaactcaaagcggatcatctattgct
gataatattggactaatttatggttcttatattgcgaaagaacttctccatgtgaatcac
actgatgagagcttgaagtataaaatgtctggttggctgactaatgcaaattgctcaatg
aaaaaattcaattttttactcttcatcaatcaaagactagttgattgtacatctctcaaa
cgtgcacttgattctgtatatcaaacattcttacctaaaggtagtcatccgtttgtttat
atgagtcttgaaatatctccagctaatatagatgtcaatgttcatccaacaaaacatgaa
gttcatttcttgcacgaagaagaaatcatagaatctgtacaaaaagctgtagaaatgaga
ttgcgagattgcaatcattctagatcattttacactcaaactttacttcccacgtcgtca
aatatttctacacaagagatagtgaaacaaaaagcgacaacagaactcccacattcttca
aaagtgtatgatcatcaaatggtcaggactgacagcaaattacaaaagcttgatgctttt
ttaaatgtattttcaagtgagacacaggagaataaagatccatcaaaagtttcaacctct
aatgtgacgactatgaaaaaaacatctgaaaatataaatagtggtgcaaaagttttgaaa
atgtctgttcccaaacaagaaaaatcggataacgcaactaaagataacctaacatcgacc
tcgtttccaaaaagacgacaaataaaattaacaagtgtgttaactctccaagaagaaatc
agacagaatgctcatagcgatcttgtaaagatcatgagcgatcatacatgggttggttgc
atcgatccagagttggccctgatacaacatggtactaaactgtacttgacaaacacaaca
cgactctctgaggagttgttttatcaaataatgatatatgatttcggaaactttggcatt
tttcgtttgtctgaaccagcaccaactatagagcttgttaaacttgcacttgatgatgaa
gagagtggttggaaacctgcagatggtaataaatctgacttagccaatcatattgtggag
tttctaaaagacaaagctgatatgttatctgactacttttcttttgaggtggacggaaat
ggaaatattacagggataccaatgctacttaaagattacataccatctatggaaggcctt
cctatgtttgtattgcgattaactactgaagttgattgggaatcagaaatagattgcttt
aaaactttttgcagagaatgtgctcgattttactctgtacgtaaaggctttattgacctc
cttgagataataaaagatgcaaaattagatgatgagtgtgaaatgcttgattcttccttt
tctgccacagattccacctcaaatccaccagctggaacaaattcttcaaataaaagtggt
tcatggaagtggacaatagaacatatagtgtatagggctttccagaaaattctccttccc
gataaatcaatgttggaagatggtacatttttacaacttgcaaatttaccggatttgtat
aaagtttttgaaagatgctga
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