Styela clava (leathery sea squirt): 120347004
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Entry
120347004 CDS
T07291
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120347004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
120347004
Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120347004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
120347004
NCBI-ProteinID:
XP_039272737
LinkDB
All DBs
Position
Unknown
AA seq
302 aa
AA seq
DB search
MPRPRVQTSLTLFGSPPYGFRISGGIEFNQPLVITRVTPGSLAARSGVQSGDVVIAVNNQ
YVQDLSQDQCEAKVRQAVGSLHMVLEKNAAKVTELPGGQVQVDGDRSIYTAVKDTQQRIS
KYNRSAKPFGAPATTATECEVEKPAETKSGFKPVSFKPKTQSADETTLPTSARGEPDGIN
SATEGIAKVTIENPDDANANGSAKSTYDVGKYNRRPAPFKPGNASNNSNVATLPEPDDFP
PPPDFVLDSQEQPPYMVTSNAGSGNPTNKTVTKKIIVGGNSPLGLYSGANAAETYKAQVG
DL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcccaagggttcagacatcattgactttattcggatctccgccatatggattt
cgaatttctggaggaatagaattcaaccaacccttggttataactcgagtaacccctgga
agtttagctgcaagaagtggtgtgcagtcaggagatgttgttattgcagttaacaatcaa
tatgtacaagatttatctcaagatcaatgtgaagcaaaagtgagacaagcagttgggtct
ttacatatggttctcgaaaagaatgctgcaaaagtaacagaactcccaggaggtcaagtt
caggttgatggtgataggagtatttatactgctgtcaaagacacccagcaaagaatatcc
aaatataatagaagtgcaaaaccatttggtgcgccggcaacaactgcaacagaatgtgaa
gtagagaagcccgcggagacaaaatcaggatttaaacctgtttcatttaaaccaaaaacg
caatctgccgatgaaaccacgcttcctacttctgctagaggggagccagatggcataaac
tcagctacagaaggtattgcgaaggtaaccatagaaaaccctgacgatgcaaatgcgaat
ggctcagctaagtctacttatgatgtaggcaaatataatcgcagaccagcgccattcaaa
cccggaaatgcatctaataattctaatgttgcaactctaccagaaccagacgactttcct
ccaccaccggattttgtgctagactcccaggagcaacctccatatatggtaacgtcaaat
gcaggttctggcaatccaaccaacaagacagtaaccaaaaagataattgttggtggtaac
tctccactaggtctttactcaggtgcaaatgcagccgagacatacaaggctcaggttgga
gatttataa
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