Styela clava (leathery sea squirt): 120347008
Help
Entry
120347008 CDS
T07291
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120347008
Ion channels [BR:
sclv04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
120347008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
120347008
NCBI-ProteinID:
XP_039272746
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MTDSTPAAAPTCNCTQSDTAVVDVSVTTEYLTTNATHTPCEQTRMWYVFLSSSLITFFGG
LLIILIWRVFNYMCCAAYSQIPKDGNSSKGTSSDKDNSDADSTKSAGPLEVEWMTVVKDW
AGVMISAQTLIGRILVVLVFMLSIGALVIYFIDSSDPIETCKNFYTDTTLQIDMAFNLFF
LLYFGLRFIAANDKLLFWLEVNSIVDFFTVPPVFVSVYLNRTWLGLRFLRALRLLQFSEI
LQFVNILKTSNSIKLVNVLSIFLSTWLTGAGFIHLVENTGDPWLDFSNAQKLTYWECVYL
CMVTMSTVGYGDLYAETTIGRFSMVLFIFVGLAMFAGSVPEIMDLIGNRKKYGGAYTSVS
GRKHIVVCGHITLESVSYFLKDFLHKDRDDVNVEVLFLHGIPPNLELEALFKRHFTQVEF
FEGSVLNSNDLSRVKMEDADSCVILANKYCQDADAEDASNIMRVISIKNYHPKVRIIIQI
MQYHNKAHLLNIPSWSIEDGDDVICLAELKLGFIAQSCLAPGFSSLMANLFSMRSYIKIE
EDSWQKHYLAGVGSEMYTEYMSSSFVGYSFPKVCEICYKKLKLLLLAIEVKYENDETKIM
INPGNHVKIQEGTLGFFVAQSAKEVKRALLYCKSCHEDIAYPDLIKSCECRRKKELSSKR
KSHLFVFPSSKPVHGNRKKAKTLVVSEGSCLLFDGNHTNSDRQICSVPPMHRAEIPPPPY
TKQASAPSQKDSLPTTNTQLMRQPSDSLRHRKDQSSNTQLLSSIISPATNVQSTQDVDSA
MKYDVTGMFHWCPAKDIEKCILSRDKAANTVLNGHIINCIFGDAKSPLLGLRNFIMPLRA
SNFHYHELKHIVLLGDLGFIRREWDTVCNFPKISILPGSPLSRADLRAVNVNLSDMCVIL
SANQNAIEDPSLQDKESILASLNIKSMQFDNSISLLQASSRGFPPHETPATNVHDTSQGV
TSGSNIPMITELVNDTNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLVSATYFN
SNALTLIRTLITGGATPELEAILAEGNALRGGYSTAESLANRDRCRVAQLALFDGPFARL
GNGGNYGDLFVRALQKYNLLCFGIYRFRDVNNPVASLTSKRYVITSPPDDFKLVPSDLIF
CLMQFDYCGGNPLSTRTSTSSWGGGQKKPHFLQSSSETSNALTQPYKSGNDVERGERPYQ
GSNSLTVETHPPSYASHPTYPSYPNLPKSPNRRDSTLEQAHSRQHTYPDFSGKQRSLAQS
NAVNNNHNKTDRLHRTLSPPHHQKKPSFKGQHDRASADGSSGKSHQRRQRQQKGKIKSDK
STHGRERISATYTREDEKVLLMDDFMRM
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgacagattctactcctgcagcagctcccacatgtaattgtacacaatcagacacagct
gttgtggatgtatccgtaacaactgagtatttgacaacaaatgccacacacacaccatgt
gaacaaactcgcatgtggtatgttttcctcagttcatcattaatcacattttttggtgga
cttctcatcatattaatatggagagttttcaattacatgtgctgtgctgcttacagtcaa
atccccaaagatggaaattcaagcaaaggcacatcaagcgataaagataattctgatgca
gactcaacaaaatctgctggaccattagaagtggaatggatgactgttgtaaaagattgg
gctggtgttatgatatctgcacagactttaattggaaggatactggtcgtcctcgttttt
atgctcagcattggtgctcttgttatatatttcattgattcatcagatcctatagaaacc
tgcaaaaatttttacactgacacaacactgcagattgatatggcattcaacctatttttt
cttctttactttggccttcggttcattgctgccaacgacaagttgttattctggctagag
gtcaattccattgtcgattttttcactgttccacctgtttttgtttctgtttatcttaat
agaacatggttagggcttcgatttcttcgcgcccttcgcttactgcagttttctgagatt
ctgcaatttgttaatatactgaagacaagcaatagcataaaacttgtgaatgtactgtca
attttcttgagtacgtggttaacaggagccggatttattcacttggttgaaaacacaggt
gatccatggctcgacttttcaaatgctcaaaagctaacttattgggagtgtgtatatctc
tgcatggtcaccatgtctacagtcgggtatggagacctgtatgctgagacgacgattggt
cgattttcaatggtgctattcatatttgtgggactcgctatgtttgccggttctgtacca
gagataatggatctcattggaaacagaaaaaaatatggaggagcttatacctcagtaagc
ggaagaaagcatattgtcgtatgtggacatatcactctggaaagtgtttcctattttcta
aaagacttcttacacaaagatagagacgatgtcaatgtggaagtcctatttttacatggg
attccacctaatttagaacttgaggctttattcaaacgacatttcactcaggtcgaattt
tttgaaggttctgttctaaattcaaatgatttgtctcgtgtaaagatggaagatgctgac
tcgtgcgtaatactcgcaaataaatattgtcaagatgcagatgcagaagatgcatctaat
ataatgcgagtaatttcaattaagaattatcaccccaaagtgagaatcatcatacagata
atgcaatatcacaataaagcacacttactcaatattccaagctggagtatagaggatgga
gatgacgttatctgtcttgctgaactcaaactaggcttcattgcacaatcatgccttgca
ccaggattttcaagtttgatggcaaatttattttctatgagatcttatattaagattgaa
gaagattcatggcaaaaacattacttagctggagttggatcagagatgtacactgaatat
atgtcaagctcgtttgttggatattcgtttccaaaagtttgcgaaatttgttacaagaag
ttgaagttattactgcttgcaattgaagtcaaatatgagaatgatgaaacgaaaattatg
atcaacccaggtaatcacgttaaaattcaggagggaacacttggattttttgtcgcacaa
tctgctaaggaagtaaagagggcactgttatactgcaaatcatgtcatgaggatatcgca
tacccagatcttataaaatcatgcgaatgccgacgaaaaaaagaattgtcaagcaagcgc
aagtcgcacctgtttgtatttccgagcagcaaaccagtacacggcaatcggaagaaagca
aaaacccttgttgtatcggaaggttcatgtctactttttgatggcaaccacaccaattca
gacagacagatttgttcggttcccccaatgcatcgcgctgaaataccacctccgccttac
acaaagcaagcatctgctccttcacaaaaagactcactacctactacgaatacacaactt
atgagacagccttcagacagtctcaggcacagaaaagaccaatcttccaatacacaactc
ttgtcatccataatatcaccagcgaccaatgttcaaagtacacaggatgtcgattctgca
atgaaatatgatgttactggaatgtttcattggtgtcctgctaaagatatagaaaagtgt
attttgagtcgagacaaagctgcgaacacagttctcaatggacatatcatcaattgtata
ttcggagatgcaaaaagtcctttgttgggattgcgaaattttataatgcctttgcgagca
tcaaactttcattatcatgaactaaaacatattgtacttcttggagatcttggttttatc
agaagagaatgggatactgtttgcaactttccaaaaatatctatattaccaggttctcca
ctaagccgagccgatttacgtgctgttaatgtaaatttatcagatatgtgtgttatctta
tccgctaatcagaatgcgattgaagatccatcattgcaagataaagaatctatattagct
tcacttaatattaaatcaatgcaatttgataacagcatcagtctgctgcaggctagctcg
cgaggttttccaccacatgaaactcctgctacaaatgttcatgatacatcacagggtgta
actagtggatcaaatattccaatgataactgaattggtaaatgatacaaatgttcaattc
ttggatcaagatgatgatgatgatcctgatacagaattgtatcttacacaaccttttgct
tgtggaactgcttttgctgtcagtgttttggattctctcgttagtgcgacctatttcaac
agcaatgctctcacattaataagaactttaataaccgggggagctactccagagttggaa
gcaatactcgctgaaggtaatgctttgaggggtggatattctactgctgaatccttagca
aacagagatagatgcagagtggcacaattagctttgtttgatggcccgtttgcaagactt
gggaatggtggaaattatggagatttatttgtcagagctttacagaaatacaacctacta
tgttttggaatatacaggtttcgtgatgtcaataatccagttgcaagtttaacatcaaaa
cgatatgtgattacaagtccaccagatgattttaaacttgttccatccgatcttatattc
tgcttaatgcagtttgattattgtggtggaaatcctttatccacaagaacatcaacatct
tcatggggtggtggtcagaagaaaccccattttttacaatcttcttctgagacatccaat
gccctgacacaaccatacaaatcagggaatgatgttgaaagaggagaaagaccttatcag
ggatcaaattctcttacagttgagactcatccaccgagttatgcatcacacccaacctat
ccgtcttaccctaacttgcctaaatctccgaatagacgtgactctacattagagcaagcc
cattcaaggcagcacacttatccagacttctctggaaaacaaagatctttggctcagtca
aatgctgtgaacaataatcacaacaaaacagacagactgcacaggaccctgtctccacct
catcatcagaaaaaacctagtttcaagggtcagcatgatcgagcaagtgctgatggatcg
agtggcaaaagccatcaaagacgacaaagacaacaaaaaggaaaaattaagtccgacaag
tcaacccacggtcgtgaacgtatttcagcaacatatactagagaagatgaaaaggtgtta
ttgatggatgattttatgagaatgtga
DBGET
integrated database retrieval system
