Styela clava (leathery sea squirt): 120347097
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Entry
120347097 CDS
T07291
Name
(RefSeq) nucleoporin GLE1-like
KO
K18723
nucleoporin GLE1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120347097
03015 mRNA surveillance pathway
120347097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120347097
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120347097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
120347097
NCBI-ProteinID:
XP_039272872
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MPSPLSVIESLRKTEKGRLKYYNEWTAKDLASDIASPKIRRSTEGIVFEVSSIRAALEAI
DDDANVHAENAIDEEKTKSRLEMSRKEKDLDEGFRDFIDVDAPLRQYEAELEEQKRRENI
EQIKKQEEFYAEIERKTQERVRNRRKEELQRKSREEERMKRFFQEAEESALRIRREMQAH
QDHIIKTRQQEMEERKLRLQLLQMKKQKEDFEKLANHMRGIQNVQKDCLERIRELPQNIV
AEIGNSRIPIFVGNLNEIYNRSNSVFTEAKNRGKTDENEIVRLKSDSEMMTNIRKNILSE
IDLVGLRVKELEIRAEKEKQELILRQKREAAQAEKLAAESAKAKAAASAAAQAPTQSLTE
LHKNLKSKMTEYESEGRKLTKSSDRSMKQLAMGLSRAVSVPISSITDRSGSDLKSRLKIL
VNVIKTNPVTSGTQTVSTKGNPAAQKFAINLIARKIVSQANEQVSANFTSAFSIAFMVIG
IWAESSDFGDLFLAHLQSKCIYSVPMYLLKQDSQTEEEHQKLLGYIVSEDGAVEQQDKYL
RRMSGLVRLYAAVIQSPLPPGVSVHPHGLAKGWAWLAEMLNMEPQPDVSATVLYDFLEVA
GHALMKTYKMQFEKLLYVLCHDYFPKLEEITGVGHRAPLIRLKNFLEKCIKEKSVPMPKG
RLDKGFWNTYHSGEVVGE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaccactgtcggtgatcgaatctttgagaaaaacagagaaaggccgattgaaa
tactataacgaatggacagcaaaggacttagcaagtgatattgcgtcgccaaaaatacgt
cgaagcacagaaggaattgtttttgaagtgtcgtcgatccgagcggccctcgaagcgatt
gatgatgacgcaaatgttcatgcggaaaatgctatcgatgaggagaaaacaaaatctcga
cttgaaatgagtaggaaagaaaaagacctggatgaaggatttagagattttattgatgtt
gatgcgccgcttcgtcagtatgaagctgaattagaggaacagaaacgaagggaaaatatt
gaacagattaaaaaacaggaagaattttacgctgaaattgaaagaaaaacacaggaaaga
gtcagaaataggagaaaagaagaattgcagagaaaatctagggaagaggagagaatgaaa
agatttttccaagaagccgaggagagtgcattgaggattcgccgtgagatgcaagcgcac
caagatcatattattaaaactagacaacaggaaatggaagagagaaaactcagacttcaa
cttttgcaaatgaaaaagcagaaagaagattttgaaaaacttgcgaaccacatgagagga
attcaaaacgtacaaaaagattgtttggagaggattagagaactcccacaaaacattgtt
gcagaaattgggaatagtagaattccaatttttgtcggaaatttgaatgaaatttataat
cgctcaaattcagtgttcactgaagcaaaaaatcgtggaaaaactgatgaaaatgagatt
gtacgtcttaaatcggattcggaaatgatgacaaatatacgcaaaaatattctcagtgaa
attgacttagttggtttacgagtcaaagaactggaaatccgagctgaaaaagagaaacag
gaactgattttgaggcaaaaacgggaagctgcacaggctgaaaagcttgctgctgaatcg
gcgaaggctaaggctgctgcgtcagctgctgcacaggctccaactcaaagtttaacagag
ctgcacaaaaatttgaaatcgaaaatgactgagtacgaatcagaaggacggaaattaaca
aaatcaagcgatagaagcatgaaacaactagcaatgggtttaagcagagcggtcagtgtt
cccatatcttcgattacagatcgttctggttccgatttgaaaagccgccttaaaatcctc
gtgaacgttataaaaacaaaccctgtgacttcgggaacgcagacagtttcaacgaaagga
aacccagcagcacaaaaatttgcgataaatttaatcgcgcgtaaaattgtttcgcaggcg
aacgagcaagtttcagcaaactttacgtcagcgtttagtatagcttttatggtgatcgga
atctgggctgaatcgtcagattttggggatttatttttagcgcatctacaatcaaaatgc
atctactctgttcctatgtatttgttaaaacaagattcgcagactgaggaagaacatcaa
aaacttttgggatatattgtgtcagaagatggcgccgtagagcaacaagataaatattta
cgacgaatgtctggtttagttcgactttacgcagcagtgatacaatctccgctaccacca
ggggtcagtgttcacccacatggacttgcaaaaggttgggcctggctggcggaaatgtta
aatatggaaccacagccagacgtctctgcaactgttttatacgattttttggaagttgcc
ggtcacgctctaatgaagacgtataaaatgcaatttgagaaacttttatatgttctatgt
cacgattatttccccaaactagaagaaataacaggcgtcgggcatagagcgcctttaatc
cgactaaaaaactttttggaaaaatgcatcaaagagaaatctgtcccgatgccaaaagga
aggctcgataaagggttctggaacacgtaccactctggagaggtagtgggagagtga
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