Styela clava (leathery sea squirt): 120347416
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Entry
120347416 CDS
T07291
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120347416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120347416
03036 Chromosome and associated proteins [BR:
sclv03036
]
120347416
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
120347416
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120347416
RSF complex
120347416
WICH complex
120347416
B-WICH complex
120347416
NORC complex
120347416
BRF complex
120347416
NuRF complex (fruit fly)
120347416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
HAND
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
ERCC3_RAD25_C
SWI2_SNF2
DUF4800
AAA_14
Motif
Other DBs
NCBI-GeneID:
120347416
NCBI-ProteinID:
XP_039273311
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MASKPNNESDISENSDAEETEEPVAPPDSAYASKMAQDHGKRFDFLLQQTEIFAHFMNPN
VKTKSPTSPLKIRGRPRLTSRESVSGSSTSVNATDHRHRRTEQEEDEELLSDARKTQGAI
TRFEQSPKYIQNGEMRDYQVRGLNWMISLYENGISGILADEMGLGKTLQTISLLGYLKHY
RNIPGPHMVIVPKSTLQNWVNEFERWCPSIKTVCLTGNKDQRAAIIRDVMMPGEWDVCIT
SYEIVIREKACFKRFNWRYVVIDEAHRIKNEQSKLSTIVRQFRSTNRLLLTGTPLQNNLH
ELWALLNFLLPDVFNSSEDFDSWFSANKLDDQKLVSRLHSVLRPFLLRRLKSDVEKSLLP
KKETKIYIGLSKMQREWYTKILVKDIDVINAAGKKDRVRLLNILMQLRKCTNHPYLFDGA
EPGPPYTTDAHLVVNSGKMDVLDKLLPKFQAQGDRVLIFSQMTRMLDILEDYCMWRGYNY
CRLDGQTPHEDRHRQINEYNMPGSEKFIFMLSTRAGGLGINLATANIVILYDSDWNPQVD
LQAMDRAHRIGQKKQVMVFRLITENTVEERIVERADMKLHLDNIVIQQGRLVAQSQKLAK
DEMLSMIRHGANHVFASKESEITDADIDAIIAVGEKRTEEMEERLKNLGESGLRKFTLDD
TESPYSVYQFEGKDWKDKTKEGGLLPWIEPPKRERKANYAVDQYFREALRTSEPKAPKAP
RPPKQPTVQDFQFFPPRLFELLEAEILQYRASIGYKVPRDPDGDIEAEKDQQRQIDEALP
LTEEELAEKESLLQCGFTNWTKRDFNQFIRANEKYGRDDIESISKEVEGKTPQEVIEYSA
VFWERCNELTDIDKIMAQIERGEARIQRKISVKKALDAKVARYRAPFHQLRIQYGTNKGK
NYTEEEDRFLICMLHKLGLDRENVYDELRVAVRHAPQFRFDWFIKSRTATELQRRCNTLI
TLIERENQELEERDKSSGKKGRQRGTNTPGGGSRASTPSSVGGGSQKRKLDTGISNSGRK
KKKD
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaaccaaacaatgaatcagatatatctgaaaattctgatgcagaggaaact
gaagaacccgtggcaccacctgattctgcatatgccagcaaaatggctcaggatcatgga
aaacggtttgactttttgttgcagcagacagaaatttttgctcatttcatgaatcccaat
gtcaagaccaaatcacctacgagccctctgaaaattcgtggacgacccagactaacttct
cgtgagtctgtgtcaggttcgtcaactagtgtaaatgcaactgatcatcgtcatcgtaga
acagaacaagaggaggatgaggaactactttcggatgctaggaaaacacaaggagcgata
acaagatttgaacaatctcctaaatacattcaaaatggtgaaatgagagattatcaagtc
agaggattaaactggatgatatcattgtacgaaaatgggatcagtggtattctcgctgat
gaaatgggtctgggaaagactttacaaaccatctccttgttgggctatctcaagcattac
agaaatattcctggtccccatatggtgattgtaccaaaatctactcttcaaaactgggtg
aatgaatttgagcgttggtgtccatcaatcaaaacggtatgtttaacaggaaacaaagat
cagagagctgcgatcattcgtgatgttatgatgccgggagagtgggatgtttgtattaca
tcatatgaaattgtaattcgtgaaaaggcttgttttaaacgattcaactggagatatgtt
gttattgatgaggcacatagaattaagaatgagcagtcaaagctctctaccattgttcgc
caatttcgcagtacaaatcgacttctgttaaccggtacaccactgcaaaataatttgcat
gaattatgggctttactcaactttctactaccagatgtttttaattcttctgaagatttt
gattcctggttttctgcaaataagctagatgaccagaagttggtttcacgtttgcattct
gtattgagaccttttcttttaagaagattgaaaagtgatgttgaaaaaagcttactgccg
aaaaaagaaaccaagatttacattggtttgagcaaaatgcaaagagaatggtatacaaaa
attctagtcaaagatattgatgtcatcaacgccgcaggcaaaaaggatagagttagactt
ttaaatattcttatgcagttgcgaaaatgtaccaatcatccatacctgtttgatggggca
gaacctggaccaccttataccacagatgcgcatcttgtagtcaatagtggaaaaatggat
gttctcgataaacttcttccaaaatttcaagcgcaaggagatcgtgtgctgatcttcagt
caaatgacgagaatgttggatattctagaagattattgtatgtggaggggatacaattac
tgtagattggatggtcaaacaccccacgaggatagacatcgtcaaatcaatgaatacaat
atgcctggtagtgaaaaatttatttttatgttgtcaactcgtgctggtggtttgggtata
aatctggcaacagcaaatatagtaattttatatgacagtgattggaatcctcaagtcgat
ttacaagctatggacagggcacatcgaattggtcagaaaaagcaagtgatggtattcaga
ttgattacagaaaatacagtggaagagagaattgttgaacgagctgatatgaaattgcat
ctggacaatattgttatccaacagggtcgactggtagctcagagtcaaaaacttgccaaa
gatgagatgctgagcatgattcgacatggagcgaatcatgtttttgcatctaaagaaagt
gaaatcacagatgctgatatcgatgctattattgctgtaggagaaaagagaacagaagaa
atggaagaacgactgaaaaatcttggcgaaagcggacttcgtaaatttacgttggatgac
acggagagcccgtactctgtttaccaatttgaaggcaaggattggaaagataaaacaaaa
gaaggtggcttactgccttggattgaaccacctaaaagagagagaaaggctaactacgcc
gttgatcagtacttccgagaagccctgagaacaagtgaaccgaaggcacccaaagcccca
aggcctccaaagcaacctacagttcaagattttcagttttttcctccccgattatttgaa
ttgcttgaggctgagattttacagtatcgtgcttctattggatacaaagtacccagagat
ccagatggagatattgaagctgaaaaagatcaacaacgccagattgatgaagcattgccg
ctcactgaggaggaactagctgaaaaagagagtcttctgcaatgtggattcaccaactgg
acaaagcgtgatttcaatcaattcatcagagctaatgaaaaatatggacgtgatgatatt
gaaagtatctccaaagaagtggaaggcaagacgccacaagaagttatagaatattccgca
gtattttgggagagatgcaacgaattgactgacattgataaaataatggcacagattgaa
agaggagaagctcgcattcagcggaaaattagtgtcaaaaaagctcttgatgcaaaagtt
gcaagatatcgagccccattccaccaacttcgtatccagtacggaacaaataaggggaag
aattacacggaagaagaggatagattccttatttgcatgctgcataaacttggacttgac
agagagaatgtttacgatgaactacgcgtggcagttcgacatgctccccaattcagattc
gattggttcataaagtccagaacggcaacagaacttcagcgaagatgtaacacccttatc
acattaatagaaagagaaaaccaagaactggaagaaagagacaagtcatctgggaagaaa
gggaggcaacggggcaccaatacaccaggtggaggatcaagagcatcaaccccttcttct
gttggtgggggctcccagaagcgaaaacttgatactggaatatcgaattctggtaggaag
aagaaaaaggattaa
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integrated database retrieval system
