Styela clava (leathery sea squirt): 120347477
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Entry
120347477 CDS
T07291
Name
(RefSeq) Bardet-Biedl syndrome 1 protein homolog isoform X1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sclv03037
]
120347477
Cilium and associated proteins [BR:
sclv03037
]
Primary cilia and associated proteins
BBSome
120347477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
TcfC
Beta-prop_EML_2
TcdB_toxin_midN
PQQ_2
Motif
Other DBs
NCBI-GeneID:
120347477
NCBI-ProteinID:
XP_039273408
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSRMSNNKAKELENEHENWIEAHFDPMAGFYTFSPCLSLTDLNGDGDYKLLLASLGSGVY
NMKLKVFKGTTLVQETSLLDLPVGICTFYMDLHEPRIPGIAVASGPFLYVYKNMRPYYKF
TLPLLPINPIESDIWSQVSEDKIDIKSLWTTLSSIKGHLGDISLTPRSLQFLLLETLDER
MEFVAHHKSTPLKRQTVITCLSTMKKSVPEDDAISCVVVATESKEIYILDSEAFSILQKN
HLPDTPAFINTSGLYDVDFRIFVACRTGKVYIVKKDQETVYLCLELQSQIVGMERVHKHL
IIVCMDNTLSCYTGKGKRLWRKYLTTNAVCTCLMDHNSKGFKAVLVALENGEVQVYRDKY
LVDSIKLREPAQALFFGKYGREDSTLIVILRSGAMNLLIMKRTAVYNDKDTHKGPPAAQS
IKLNISKKTQIFVDQTVRERENGIEMFQSCQNDVKRFKLNTAATYLKALDSSTTPLSTDP
DVPLKISATVQGLGPVFKLLITLQNSNANYSVSDPKLATDLKLCFKYSDLTYKISPQLLQ
VPALVPGVSYRLEARVECIISNRPAKEEIRALILKNGMTRPIVTANIFMPASEATVVV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaatgtcgaataacaaagccaaagaattggaaaatgagcatgaaaattggatt
gaagctcattttgatccaatggcaggcttctacacgttttccccatgcctgtcattaact
gatttaaatggagatggagactataaactgctgctagcaagtttaggtagtggagtctac
aatatgaaacttaaggtgtttaagggtacgactttagttcaagaaacttctcttctggac
ttgcctgtgggaatatgcacattttacatggatctccatgaaccaaggattcccgggatt
gctgtggcatctggaccgtttctttatgtttataaaaatatgcgtccctattataaattc
accttgccacttttgcccatcaatcctattgaatctgatatatggagtcaagtctctgaa
gataaaatcgatattaaaagtttatggacaaccttatcttccatcaagggtcatcttggt
gatatttccctcacaccacgttcattgcagtttttacttcttgaaaccctagacgaacgg
atggaatttgtagcgcaccacaaatcaactcctcttaaaaggcaaaccgtaataacctgc
ctcagtaccatgaaaaaatctgtgccagaagatgatgccatatcgtgtgtcgttgttgca
accgaaagtaaagagatatatattttggactcagaggcattcagtatacttcagaagaat
catctccctgatacacctgctttcataaacacttctgggttatatgatgttgactttaga
atttttgttgcatgtcgtactggaaaagtttacattgtgaaaaaggaccaagaaactgtt
tatttatgtttagaacttcaatcccagattgttggaatggaaagagttcataaacattta
attatagtgtgcatggataataccctttcgtgctatacaggcaaaggtaaacgactatgg
agaaaatatttaacaacaaatgctgtttgtacctgtcttatggatcataacagtaaaggg
tttaaagctgttcttgtggcacttgaaaatggagaagtacaggtatatcgggataagtat
ctggtagatagtataaaattacgagagccagctcaagcattgttttttggaaaatatggg
cgagaagacagcacgctcatagttattctcagatctggagctatgaatctgttaattatg
aaacgaactgcagtgtataatgataaggatacacacaaagggcctcctgctgctcaaagc
ataaaactgaacatatcgaagaagactcaaatttttgttgatcaaactgtgcgtgaacga
gaaaatggaattgagatgtttcagtcctgtcagaacgatgttaaaagatttaaactcaac
acagcagcaacttacttgaaggcgttggattcaagtacaactccgttatcaacagaccct
gatgtaccattgaagatctccgcaacagttcaaggattaggaccagtgtttaagctactc
ataacccttcagaatagtaatgcaaactacagtgtatccgatcctaaactagctactgat
ttgaagttgtgcttcaagtattcggacttgacctataaaatatctcctcagcttttgcaa
gttcctgctttagtgcctggtgtttcgtatagactggaggcgagagttgaatgtattata
agcaaccgaccagcaaaagaagagatcagggcgcttattctcaaaaatggaatgacaaga
ccgattgttactgccaatattttcatgcctgcatcagaagcaactgtcgtagtttag
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