Styela clava (leathery sea squirt): 120347561
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Entry
120347561 CDS
T07291
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120347561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120347561
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120347561
U7-dependent histone pre-mRNA processing factors
120347561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
Spo7_2_N
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
120347561
NCBI-ProteinID:
XP_039273525
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MNRDRDLIDLERSSRSVFVGNIPYEATEESLRDIFSEVGPVVSFRLVFDRESGKPKGYGF
AEYQDTETAMSAMRNLNNRELHGRSLRVDHATSEKNRIMEDLGQMGPIGPPRESPYGEPV
PSRDAPEAISKAVASLPPEQMFELMKQMKQCIQNNPVEARNMLLQNPQLAYALLQAQVVM
RIVDPEIAMKMLHRQNPVPNLIPAGEPLDRPVDGRPNGDPPGRSPYGNREPPRRMIDEPM
DIPRRRDGSPPPRMLPRRGHPDDRMPMDIPMDRGRGEPMGIGPRDHPIDRRGPPMGPRGD
RGRRSPEPFGRGPFGREFPDRGMDAIPGMGGLPMDRGPPMDRGPPMDRRPPDRGPIDRDG
PPFHDRGGRLLDQRGGSLERNNVPGPSRDRGSSLERGGGDPRRGLAPQPGPTSGAAPPPA
ASGPAAAGAPDPNNPDQEKAALIMQVLQLTPEQIAMLPEEQRKSIMILKEQITGGRQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagaccgggatttgattgatttggaaagatcttcaagatcagtttttgtggga
aatattccttatgaggcaactgaagagagtctaagagatatattttcagaagttggtccg
gttgtcagttttcgtctcgtttttgaccgagaatctgggaaaccaaaaggatatggattc
gctgaatatcaagacactgaaacagcgatgagcgctatgcgaaatttaaataatcgcgaa
ctgcatggtcgttcgctgagagttgatcatgctacaagtgagaaaaatcgaattatggaa
gatttaggtcaaatgggccctataggcccaccgagagaaagcccatatggtgaacctgtc
ccatcccgagatgcaccagaagcgattagcaaagcagttgccagtttaccgcctgaacaa
atgtttgaacttatgaaacagatgaaacaatgtattcaaaataacccagttgaggctaga
aatatgcttttacaaaatccacaactggcttatgccttgctacaagcacaagttgttatg
cgtattgtggacccagaaattgcaatgaaaatgcttcatcgacaaaacccagttcctaat
cttattcctgcaggtgaaccattagaccgaccggtcgatggtcgaccaaatggtgaccca
cctggcagaagtccgtatggaaatcgtgaacctcctcgcagaatgatagacgaacccatg
gatataccaaggcgacgagacgggtccccaccacctcgaatgttgccgcggcgtggacat
ccagatgaccgaatgcccatggatattcctatggatagagggcgtggtgagccaatgggt
ataggtcctcgtgaccatcctattgatcgaagaggccccccaatgggtccaagaggagat
agagggaggcgtagccctgagccgtttgggcgtggcccgtttggaagagaatttccagat
aggggcatggatgctataccaggtatgggtgggttgcctatggatcgtggaccaccaatg
gacaggggtcccccaatggatagaagaccaccagatcggggacctatagacagagacgga
cctccatttcacgaccgaggtggccgattgcttgatcaaagaggaggatcattggaacgt
aacaatgtgccgggtccaagtcgtgatcgtgggtcatcgttagaacggggtggtggcgac
cctcgaaggggactggcgccacaacctggtcccacaagtggggcagcccctccacccgcc
gcatcggggcctgcagctgctggagcccctgaccctaataaccccgaccaagaaaaggca
gcgttgataatgcaagtattgcaactcactccagaacaaatagcaatgttgccagaagaa
cagaggaagagtatcatgattctcaaggaacagatcactggagggcgacaatga
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integrated database retrieval system
