Styela clava (leathery sea squirt): 120347591
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Entry
120347591 CDS
T07291
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120347591
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120347591
04131 Membrane trafficking [BR:
sclv04131
]
120347591
03036 Chromosome and associated proteins [BR:
sclv03036
]
120347591
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120347591
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120347591
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120347591
Membrane trafficking [BR:
sclv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120347591
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120347591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
120347591
NCBI-ProteinID:
XP_039273566
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MSDSPYENTRSRKKDEESSSTSNSLTPTSISVDLKNETFVKVRNLQAIMKEGKKAKAKRE
LEMEEDFNSLAISPSIKSPKEVRIPKLNYDIAKPSESGKHVGLVFDSRMMQHKASKTLDY
RRKHPERPERISRPLERLCGAAILDRVYLVPGREATKDELLLVHQGDHVDDIASTANIES
VEDFEEKQGRYNSIYLCKESYMCALVSCGCTLSIVDEVVKGSLTSGFALVRPPGHHAETH
TAYGFCLFNNVAVAARHAQKLAKNERLVESEEMYKVLILDWDVHHGNGTQNMFYDDPSVL
YISFHRYDNGIFFPSTEDANYDRVGNGKGLGFNINIPWGGARMGNSEYYTAFERIVMPIA
EEFKPNLVLVSSGFDSGKGDPLGGYHVTPNMFGYMSHRLQMLACGKVVIVLEGGYNLTTV
SDSVLACVESLLEFPRDTRKIGSPDIENLKYNVPPRLKPPNTPGLSCILQVLEYIVSFWP
CLKSHKNKVDELLQVAKRLSIEKLTKSINKLEVEEDKNSKKRHSYGTRLQSSKKNENGPD
TPNLNSSSSTITPTIKSPENLTFSTPTGDSTDFIIKSNNETTENSNSFNMEDLKNALPDT
ETDNADNLSDDSYYSTASVLGGGQSPNTPSATPHTEDTENPSSAKMDGSYLDSLSEVKKV
YNKPNIDNELGAVGGEMEITTDNKTRKEITMVLSAMGLTDIDGMSMEDMIAIAQATLPEH
ASGYTVPKDNCPHVEGHVNPKTVDLLNLDTFCAMCEYVIENWTCLQCAEVFCGRFVNAHM
LDHFNETGHAVVLSHSDLSFWCYNCDAYLNNYTIKILREVYRKAHVLKHNVDLPS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcgccatatgaaaacaccagatctcgtaaaaaggacgaagaaagcagcagc
acatcaaattctttaactcctacttcaatttctgtggatttaaagaatgaaacctttgta
aaagtccgtaatcttcaggcaatcatgaaggagggaaaaaaggccaaggcaaaacgtgaa
ctggaaatggaagaagactttaattccctggcaatttcgccatcaataaaatctccaaaa
gaagtaagaataccaaaattgaattatgatattgccaaaccttcagagagtggaaaacat
gttggtttagtctttgattctcggatgatgcaacacaaagcatcaaagacattagattat
cgaagaaaacatccagaaagaccagaacgaatttcaaggccgcttgaaagattatgcggt
gcagctatactggatcgtgtatatttagtcccaggaagggaagcaacaaaagatgaatta
ttattggtgcatcaaggagatcatgtcgatgatatagcatcaactgcaaatatagagtcg
gtggaggattttgaagaaaaacaaggaagatataattctatttatttatgtaaagagtca
tatatgtgtgctctggttagttgtggttgtacactatctattgtggatgaggttgtcaaa
ggatcactgacttctggatttgccctagttagaccacctggtcatcatgcagaaacacac
acagcttatggattctgtctcttcaacaatgttgctgtagcagcaaggcatgcacaaaaa
ttagcaaaaaatgaaagattagtagaaagcgaagaaatgtataaagttttaattttggat
tgggatgttcatcatggtaacggtacgcagaatatgttttatgatgatccttctgtttta
tatatttctttccatcgatacgataatgggatattttttccatcaaccgaagatgcaaat
tatgatagggttgggaatggaaagggccttggtttcaatataaatataccgtggggtgga
gcaagaatgggaaattctgaatattatactgcatttgaaaggattgtgatgccgattgca
gaagaatttaaaccaaatcttgtcttggtatcatctggatttgattctggtaaaggtgat
cccctcggtggatatcatgtcactccaaacatgtttggatatatgtcacataggttgcag
atgttggcatgtgggaaggttgttattgtattggagggtggatacaatctaacaacagta
tcagacagtgtgcttgcttgtgttgaatcattacttgaatttcctcgtgatacaaggaag
attgggagccccgatatcgagaatctaaaatacaatgttccaccaaggttaaaacctcca
aatacgccaggtctgtcatgcattctacaagtcctggaatatattgtttcgttttggcct
tgcttgaaaagtcacaaaaacaaagttgatgaattgcttcaggttgcaaaacgtctttct
attgagaaattgacgaaaagcattaacaagttagaagttgaggaagacaaaaattcaaaa
aaaaggcacagttatggtacaagattgcaatcttcaaagaaaaacgagaatggaccagat
accccaaatttgaattccagctcatctacaataacaccgacaataaaatcacctgaaaat
ttaactttttctactccaactggtgattcaacagactttattataaaatctaataatgaa
acaactgaaaatagcaattcattcaacatggaggatttaaaaaatgctttacctgatact
gaaaccgataatgcagataacctttcagatgattcttactatagtacagccagtgtgctg
ggtggtgggcagtcacctaacacaccgagtgctactccccacacagaagacacagaaaat
ccatcatcagcaaaaatggatggaagttatctcgattccttatcagaggttaaaaaagta
tataacaaaccaaatatagataatgaacttggtgcggtaggtggggaaatggagataaca
actgataacaaaacaaggaaagagattactatggtgttatctgcaatgggtcttactgac
attgatgggatgagtatggaagatatgatagctatagctcaagcgacacttcctgaacat
gcaagtggatatacagttcctaaagataattgccctcatgttgaaggtcatgttaacccc
aaaacagtggatttactaaacctggacacattctgtgctatgtgtgaatatgttattgag
aattggacttgtttgcaatgtgcagaggtgttttgtggaagatttgttaatgctcacatg
ttggatcatttcaatgaaactggacatgctgttgtgttaagtcattctgatttaagtttc
tggtgttacaattgtgacgcatatctcaacaattatacaataaagattttacgtgaagtg
tacaggaaggcccatgtattgaagcacaatgttgatctaccttcctga
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integrated database retrieval system
