Styela clava (leathery sea squirt): 120347990
Help
Entry
120347990 CDS
T07291
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120347990
Membrane trafficking [BR:
sclv04131
]
Protein recycling
Others
Others
120347990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
NCMAP
Motif
Other DBs
NCBI-GeneID:
120347990
NCBI-ProteinID:
XP_039274036
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MTLYRTGTSALLLLWIFYATEGSIYSSKLLYKNEWINLDTERGISIRQSLLHSRSRRSSS
PSTGPKVHRFDLKNATTHNQALIHWSGEKSSVVFILTRKKSGSSTNKVTDSTLWRSSDYG
KTYKVMTSQFPEGAILKSYFVCPTDKKKVIFVDDFDRSKRIWISRDEGETYTNVTVPFSV
EKLEFHPEKSDWLLGYDKLMRELYCSLDFGTTWTKLGNEVTSERYFWYVKDIDKGPDADK
IVHFEYRNVLLPSVISRIYKMRSCYIPDCHDAPFQKVFDKLENIDMDSLVVQDSYVFAQK
AGAAVKLYVSYNRGEFVRARFPFYSGKAQSHFHVVSSDGECVVMGVNHDNGLTHLFFSDL
KGEHFRQSLSNVRYYNRKTSDNKVYTADVHEVQGIVGTYIANVHAPDGHNTTRISWNNGQ
SWSNLTDVRGLSSTMCKDCRLNLHLMMDQTKSGYYMPAIISKKSVPGLIIAHGTIGQTVD
DNPNHVMLFVSNDNGRSWTLARKQRHLVVVANHGAIIVAIRMIFLKAVNTLDFSSDYGAK
WNTYQFAESNEAVNVDGILTEPGENTHFLTLFGHKTYSDSWRIFQLDMSPLFSHPCKYPA
DFINITFPTQIASDTCHLGLIQKSERLRDDLQCLIPSNYKRITTKKICKCSFKDYECDLE
YESVHGPDGQFSCKKQRIGLIDNVGENTLADYETNIFTTCKNGKRNVSTGIRKIPGDKCQ
HEVENIFWKIEDCSPHTTVPTTTVNPAANVKIQLVNKTSNAKIGENLVFSIQGGTDDDVI
WHVLRPQPFSKAEERGKQSGNFTFLPEEPGKYRVQLSLRDNNKFSNMIIVEFWYPIEKVY
LYHPPVVAQKKPYNASAWTQTKYGLRGNRSLLGDVSYIWNVKAENPIYSRTNELVNIMHS
EAVGPVQISVTAENTVSWQTTSGSLHVKEYIETLVLEMECTPKMYPSNMTGIWLQEFRQA
LKLKLYTTDEFAKVVGKYNLLNEINMFVYVPPSNIFRVFIYVAPMGSDETKEHLLKATKA
LEGAIAKAKINILLSHHHSVKVKKHYIIDHDGTIVITSDSHNSSPQNGGIIAVIVIIIIL
ICVTGFFLIRRFARRTHIDRYFHCLDLRTRSSGSSHIVRSQDRSHILSEEYFDDDLDTME
GIGSQGATLKFEG
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgactttatatcgaactggtacgtctgctttgctgttattgtggatattttatgcaact
gaaggaagtatatactcatcaaaactgctctataaaaatgaatggattaatttggataca
gaaaggggcatctctatcaggcaaagtttacttcattcacgatctcgtcgttcatcttct
ccctcaactggtccaaaagttcacaggtttgatttgaaaaatgctactactcacaatcaa
gctctcattcattggtctggcgaaaaaagttcagttgtgttcattttgacacgaaagaag
tcgggatctagtacaaataaagtaacagacagcacattgtggagatcttctgattatgga
aagacttacaaagttatgacaagccaatttccagaaggtgcgattttgaaaagctatttt
gtctgtccaactgacaaaaagaaagtcatatttgtggatgattttgaccggtcaaaaaga
atttggatttctagagatgaaggagaaacttacactaatgttactgtacctttctctgtt
gaaaaactggagtttcatccagaaaaaagtgactggttgttgggatatgacaaacttatg
cgtgagttatattgctcattggattttggaaccacctggacgaagttgggaaatgaagta
acaagtgaaagatacttctggtatgttaaagacattgacaaaggccccgacgcagacaaa
attgttcacttcgaatacagaaatgttcttctaccttcagtaataagcagaatatacaag
atgcggtcatgctacattcctgattgtcatgatgcaccatttcagaaagttttcgataaa
cttgaaaatatagatatggattcattggtggttcaggattcttatgtttttgcccagaaa
gcaggagctgctgttaaactttatgtatcatacaaccgtggagagtttgtcagagcgcgc
ttccctttttattctggaaaagcccaatcgcactttcatgttgtcagttctgatggagag
tgtgtcgttatgggagtcaatcatgacaatggtttgacacacttattcttttccgatctt
aaaggagaacattttcgccagtcattgagtaatgttcgatattacaatagaaaaacatca
gataacaaagtttacactgctgatgttcatgaggttcaaggtattgttggaacatatatt
gcgaatgttcatgctcctgatggtcataacacaacaaggatatcgtggaataatggccaa
tcatggtcaaatctaactgatgttaggggtctcagctccacgatgtgtaaagactgtcga
ttgaatcttcatttaatgatggatcaaacaaaatctggatattacatgccagcaatcatt
tccaaaaagagtgttcctggactgattattgctcatggtacaatcggtcaaactgttgat
gacaacccaaatcatgtcatgttgtttgtaagtaatgacaacggcagaagttggacattg
gccaggaaacagcgacatctggtggtagttgctaatcatggtgccattattgttgctata
agaatgatttttctgaaagctgttaatactttggatttcagtagtgattatggtgcaaag
tggaacacttatcagtttgctgaatcgaatgaagctgtgaatgttgatggaatattgaca
gaacctggcgagaacacacatttcctaactttgtttggacacaagacatattcagacagt
tggagaatatttcaacttgacatgagtcctcttttttcacatccctgtaaatatccagct
gacttcataaatattacatttcctactcaaatcgctagcgatacttgtcatctgggttta
attcaaaaatctgagaggctgagagatgatttacaatgtctgattccatctaattacaag
cgcataacaacaaaaaaaatatgcaaatgctcattcaaggactatgaatgtgatctggaa
tatgaatcagttcatggaccagatggtcaattttcttgtaagaaacagcggattggattg
atagacaatgtcggtgaaaatactttagctgattatgaaaccaacatttttacaacttgc
aagaatgggaaacgtaatgtgtctactgggattcgaaagattcctggtgacaaatgtcaa
catgaagttgagaatattttctggaaaattgaagactgtagccctcatacgacagttcct
accacaactgtaaatcctgctgccaatgttaaaattcaacttgtgaacaaaaccagcaat
gccaaaattggagaaaatcttgtcttttctattcagggtggaactgatgatgatgttatt
tggcatgtgctgaggccgcaacctttcagtaaagctgaagaacgtggcaagcaatctggg
aatttcactttccttccagaggagcctggaaaatatagggtgcagctatcattgagagac
aacaacaagttttcaaatatgataatagttgaattttggtatccaatagaaaaagtatat
ctctatcatcctcccgtagttgcacaaaagaaaccgtacaatgcaagtgcttggactcaa
acaaaatatggtctccgaggcaacagatcattacttggtgatgtgtcatatatatggaat
gtaaaggcagaaaatccaatatattcaagaactaatgaattagttaatataatgcattct
gaagctgttggtccagttcaaatcagtgttaccgcagagaacacagtcagctggcaaact
acatcaggtagtctccatgttaaagaatacatagaaactctcgtattggagatggagtgc
acaccaaaaatgtatccatcaaacatgactggaatatggcttcaagaattcagacaagcg
ctcaaattgaagttgtacactactgatgaatttgccaaggttgtcggtaaatataatttg
ctgaatgaaatcaacatgtttgtctatgttccaccttcaaacatcttcagggtatttatt
tatgttgcaccgatgggtagtgatgagacaaaagaacatcttctaaaagctactaaggca
ctggaaggagcaattgcaaaagctaaaataaacatacttctgtcacatcatcattctgtt
aaagtgaagaaacattacataattgaccatgatggcaccattgtaattacctctgattcg
cacaatagttctcctcaaaatggtggaattattgcagttattgtcattatcatcattctg
atttgtgtgaccggattcttcttgatacgtagatttgcgagaagaacacacattgaccgc
tatttccactgtctggacctacgaacacgaagttcggggtcttcacatattgttcgaagt
caagacaggagccatattctttctgaagaatattttgatgatgacctagatacaatggag
ggaatcggatcgcaaggcgctacactgaagtttgagggatga
DBGET
integrated database retrieval system
