Styela clava (leathery sea squirt): 120348053
Help
Entry
120348053 CDS
T07291
Name
(RefSeq) chitinase-like protein PB1E7.04c
KO
K09444
interferon regulatory factor 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120348053
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120348053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
120348053
NCBI-ProteinID:
XP_039274097
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MTIGRTNHPYVEEVVPEGRRLRMKDWLKSRIGNPRYPGLVWLDEEKKIFRIPWKHAALHG
WDQNCDGALFRDWAEHTGACNKNTHPKQLKATFRCALHSLPDVHEERNLAKKRGDDACRV
FKMEPTSYVTNNKRRHIRIRNHKERKSNIKQQQQKGECFEQYHLPVHMQPNSMPFSTWNE
SPYLPGEYQTCNYNNNFLYPESENGDTIAFRSPDHFSVSPRRWTTQSNPDITTRGLLPPQ
IEVSHDFQPSYDISVMSQMQHSQSVPEISQQTHFSGCQNMRGMQTLPVCSSPLQVYQHSN
PKNEISGQNEISYYQSTNMGPMSPGVISTSSHTPMVSSPTSFSSVQAVGIHSMSSPNRGS
DTIAQAVASASAVIESYQAPNQFSNCPSYPTPNMFREERLINPVDAILASGAVRVSEDRP
TDILRTSHQAVSNLPTTMMSEINLSFKEYQQTPNKISSLENQIAGMCQPTTFMIDQSGNQ
QMLNGVAQGGLSPHQSEYIEGCDPTGQFITENQSADNTSSEWMSSPQHESILPSASTLLS
SSSSPTSATSPLQWISSNEKSIASPSANFFDDIQYDALSTASPTYTYDNMATASTQYNDN
LSASFTTVSTTTQHHLSTSMYGGYASQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacgattggacgaacgaatcatccttacgttgaagaagttgtcccagagggaaggcgt
ctgagaatgaaggattggcttaaaagtcgtattggaaatccaagataccccggattagtt
tggttagatgaggagaaaaaaatatttcgtataccatggaaacatgcagcactgcatggg
tgggaccaaaactgcgatggagctcttttccgtgactgggcagaacatacaggtgcctgc
aataaaaacacacatccgaagcaactgaaagcaaccttccgctgtgctttacattcatta
ccagatgttcacgaagaacgaaacttggcgaaaaaaagaggagatgacgcatgtcgagtt
tttaagatggaacctacatcttatgtgaccaataataaacgaagacatatcaggatacga
aatcacaaagaaagaaaatcgaatattaaacaacaacagcaaaaaggggaatgttttgaa
caatatcacctcccagtgcatatgcaaccaaattcaatgccgttttcgacttggaatgaa
tctccctacctgcctggcgaatatcagacatgcaactacaataataattttctatacccc
gaatcagaaaacggagacactattgcattcagaagccctgaccatttttctgtttcaccc
aggcgttggacgacgcagagcaacccagatatcactacacgtgggttattaccaccacaa
attgaagtgagccacgatttccaaccttcatatgatatctcagtcatgtctcaaatgcag
cactctcaatccgtacctgaaatatcacaacagacacacttttcaggttgtcagaacatg
cgtggaatgcaaacattacctgtgtgttctagtccattacaagtatatcagcattccaat
ccaaaaaatgaaatttctgggcaaaatgaaatttcttattaccaaagcacaaatatggga
ccgatgtcaccaggagtgatatcaacttcttctcacaccccaatggtctcctcaccaact
tcgttttcctctgtccaagccgttgggattcacagtatgtcatcaccaaatcgtgggtca
gacacgatagcccaagctgtggcatcggcctccgcagtaattgaaagttaccaagcccca
aatcagttttccaattgtccgtcataccctacacccaatatgtttagagaagaacgactc
atcaaccctgtggacgcaatattggcgtcaggggcggttcgagtttctgaagacagaccg
actgatatactaagaacctctcatcaagccgtctctaatttaccgaccacaatgatgtct
gaaatcaatttgagtttcaaagaatatcaacaaacgcctaacaagatttcttcattggaa
aaccagattgccgggatgtgtcaaccgaccacatttatgatcgaccagtctggcaaccaa
cagatgctgaatggcgtagcacaaggtggactttcccctcaccaaagcgaatatattgaa
ggttgcgatccgacgggtcaatttataacagaaaaccaatcagcagataacacatcttca
gaatggatgtcatcaccccagcacgaatcgatacttccttcggcatctactcttctgtcg
tcgtcaagctctcctacatcggcaacatcgcctttgcagtggatttcttcaaatgaaaag
tcaattgcgtccccttccgcaaactttttcgatgatatccaatacgatgcgttgtccaca
gcatctccgacttatacttatgacaatatggcaacagcgagtacacaatacaatgacaat
ctaagtgctagttttactactgtatcgactactacacaacatcacctttcaacttcaatg
tatggaggatacgctagtcaatga
DBGET
integrated database retrieval system