Styela clava (leathery sea squirt): 120348054
Help
Entry
120348054 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120348054
KO
K23209
DNA transposase THAP9 [EC:2.7.7.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120348054
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Gene silencing
Transposable elements
120348054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNP-like_RNaseH_N
TNP-like_GBD
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
120348054
NCBI-ProteinID:
XP_039274098
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MDAMKNSSGKPVMWENETVSTALKIRCATGVQGYKFLCSLGYPLPSYRTLCRRIVSLDFA
PGIQHTVLEWMQFKGVNMTATEKLCSLMLDEIQIAKAVDFDPGLHRLIGYISSEFSTAKE
PDSNVASHIICFMVKGITTKWKQLIAYFYTGMSVAPYQLWGMIKQIICHLGECEYKVVNV
VSDMASSNQGMWKEAGVITNRFQISPCVVHPYFANENLYFMADVPHLLKNLRSAVLKYDL
ELPKSTVEKYNLPTSVVSSKFFHALVELQDGKELKLAPKLARKNVNPSHYEKMRVNTASQ
LLSHTTASALRTLVAHKAMDENALTTAFFCEFVNNWFDITNCRHMGDALFENSEKKVELL
SEALNVIQSIKFVGTGWKPVQSGLQLSTTSILCLHKKFVINGKLIFLMAGRLTQDALENL
FSQVRGKGVQHPKPTQFRVAVKLISVSQFMTTPTTTNYDNDDTPHLLEFIKTNLENQQLD
PEKTTSEDSSAMEVLLGAATASFDTCEADALYYLTGWAVYKEVKKQDCEICKDAFVTMDI
VNPDECPHSLLTLFRSYTHDKNLKIDSFTQHLCHPSKKAILFLREVETIFRANVNAFYNI
SSPVTFLTDKVDSSKYDFPSCHNAAFKILKRFLNIRLNIHAKEVTNKIIEKQFASKAAAR
AQVK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatgaagaattcatcgggaaagccagttatgtgggaaaatgagactgtttca
acagcgcttaaaattcggtgtgcaacgggagtgcaagggtacaaattcctttgcagtctc
ggctatccattgccatcttaccgcacactgtgtcggcgcattgtcagtttagactttgct
ccaggaatacagcacactgtgttggaatggatgcaatttaaaggtgtaaatatgactgcg
acagaaaagctatgttctttgatgcttgatgaaattcaaatagccaaagcagtggatttt
gatcccggactgcatcgtcttatcggatacattagttccgaattttcaacagcaaaggaa
cctgactccaacgtagcatcccatattatatgttttatggttaaaggcataacaacaaag
tggaagcaactaatagcatatttttataccggcatgtccgtagccccatatcagctgtgg
gggatgattaaacagattatatgtcaccttggagaatgcgaatacaaggttgttaatgtg
gttagtgacatggcttcatccaaccagggtatgtggaaagaagcgggagtgattacaaac
aggtttcagatttcaccatgtgttgttcatccctattttgctaatgaaaatttatatttt
atggccgatgtgcctcatctgttaaaaaatttgagatctgctgtattaaaatacgatctg
gaactaccaaaatcaacagtagaaaaatataatttgccaacttcagtggtatcctcaaaa
tttttccatgcattggtggagttgcaagatggaaaagaactgaaactagcacctaaactt
gcgagaaaaaatgttaatccatcacactacgaaaaaatgcgagtgaacaccgcctcgcag
ttactaagccacaccactgcatcggcattgagaacacttgtcgcacacaaagctatggat
gaaaatgctttgacaaccgccttcttttgtgaattcgtgaataattggtttgatataacc
aattgcagacatatgggagatgctctattcgaaaattctgaaaaaaaggtggaactctta
tctgaggcattgaacgttatacaaagtataaaattcgtggggactggatggaaacctgtg
cagtctggcttgcaattgtcaacaacctcaattttatgcttacacaaaaagtttgtgatt
aatggaaaacttatttttctcatggcaggaaggcttacgcaggatgccctggaaaattta
ttttcacaagttcgtggcaagggagttcagcacccgaaaccaacgcaatttcgtgtggct
gttaaacttatatcagtctcacaattcatgaccactccgaccacgacaaattatgacaac
gacgacacaccccatttactcgaattcatcaaaacaaatttagaaaaccagcaattagac
cctgaaaaaacaacaagtgaggactccagtgcaatggaggtgttacttggcgctgcaaca
gcttcctttgacacctgtgaagcagatgctttgtattatttaactggttgggctgtgtac
aaggaagtaaaaaaacaagactgtgaaatttgcaaagatgcttttgttactatggatatt
gtcaatcccgatgaatgcccacattcgctattaactctttttcggtcttacacacatgat
aaaaatttgaaaattgatagttttacccaacatttgtgccacccatccaaaaaagcaatc
ttatttttgcgcgaagtagaaacaatattccgcgccaatgttaatgctttttataatata
agttcgccagttacttttctgacagataaagttgatagctctaaatatgattttccatct
tgccacaatgccgcttttaaaattttgaaacgttttcttaatataagattaaatatacac
gcaaaagaagtaacaaataaaattattgaaaaacagtttgcaagtaaagctgcagcaaga
gctcaagtcaaataa
DBGET
integrated database retrieval system
