Styela clava (leathery sea squirt): 120348308
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Entry
120348308 CDS
T07291
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
sclv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120348308
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120348308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120348308
Spliceosome [BR:
sclv03041
]
Complex B
Other components
Prp19-related factors
120348308
Complex C
120348308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
120348308
NCBI-ProteinID:
XP_039274362
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MASLTSILPAPSQVSYEYIEPQRQTSKAVVSSKFEPPPYGHRKGFVPRNEQDFGDGGAFP
EIHLAQYPLGLGLNKSKKSNALAVKLDAEGKVRYDVIAKQGHSKDRVVHSKFSDLIPKEI
LDEDDPELQRPDEEAVEETTEATRRALEKLTNEKISAAMPVKRAEARAPAQYIRYTPSQQ
GMSYNSGAKQRVIRMVEVQSDPMDPPKFKTNKKIPRGPPSPPAPVMHSPNRKVSVKEQQD
WKIPPCISNWKNAKGYTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEM
RAQVERKIASKEKESKEKQLRKLAEDARMKRVGIRPEGKDKDLQEREDLRKERHRDRQRE
RNIARAAPDKRNRLREERDISEEVALGLPNARRSQDSMFDQRLFNKTRGMDSGFAGGEDD
MYNVYDQAWRSEKNIGNSIYRPRADKDKDLYGDDDVDKMIKSNKFVADRGFEGADHSRER
EGPVQFERDEDDPFGLNKFLEQAKQASKRPAESGSSRSRDERKRSRK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttgacaagtattttgccggcaccttcgcaagtttcttatgaatatattgaa
ccacagcggcaaacctcaaaagcagttgtttcttcaaaatttgagccacctccttatgga
cacaggaaaggcttcgttccgcgaaatgaacaagattttggtgatggtggtgcattccct
gaaattcacttagctcaatatcctttgggtcttggactgaacaaatcaaaaaaatcaaat
gcgcttgcggtgaaacttgatgcagaaggaaaagtacgttatgatgtcatagctaaacaa
gggcatagtaaagatagggttgttcacagtaaattttccgacttaattccaaaagaaata
ttggatgaagatgacccagagttgcaaagaccagatgaagaggctgtggaagagacaaca
gaagcaacccgcagggctttggaaaaactgacaaatgaaaaaatctcagccgcaatgcct
gtaaagcgtgcagaagcaagagcaccagcacaatatataaggtatactccatcacaacaa
ggaatgtcgtacaactctggagcgaaacagagagtaatacggatggtggaagtacaatca
gatcctatggatccacctaaattcaaaacgaataaaaagattccgagaggtcctccaagt
cctcctgctccagtgatgcattcgccaaataggaaagtttctgttaaagagcagcaagat
tggaaaattcctccgtgcatttccaactggaaaaatgccaagggttatacaattcctctt
gacaaacgtcttgcagcagatggcagaggattacagagtgttcacatcaatgaaaacttt
gctaaacttgcggaggctctttatattgcggacagaaaagcacgagaagcagtggaaatg
cgagcacaagtagaaagaaagattgcttctaaagagaaagaatcgaaagagaaacaactc
cgaaaacttgctgaagatgcaaggatgaaaagagttggaatccggcctgagggaaaagat
aaggatttgcaagaaagagaagatcttcgtaaagaacgtcatcgagataggcaaagggag
agaaacattgctcgtgctgctcctgacaaaagaaatcgcctgagagaagagagagatata
agtgaagaagttgcattaggattaccaaacgctcgacgatcacaagattccatgtttgat
caacgactgttcaataaaacaaggggtatggacagtggttttgcaggaggtgaagatgac
atgtataatgtgtatgatcaagcttggagaagtgaaaaaaatatcggtaatagcatttat
cgacctcgcgctgataaagacaaagacttatatggagatgatgatgtcgataaaatgatc
aaatcgaataaatttgttgctgatcgtggatttgaaggagctgatcattctcgtgaaaga
gaaggacctgtacaatttgaacgagatgaagacgatccttttggtttgaataaattcttg
gaacaagctaaacaggcaagtaagcgaccggcggagtctgggagcagtcgttctagagat
gaaagaaaaagaagccgcaagtga
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