Styela clava (leathery sea squirt): 120348621
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Entry
120348621 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 5-like
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120348621
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
120348621
TFIIIC, fungi type
120348621
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Tau95
Tau95_N
DUF3738
DUF7181
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
120348621
NCBI-ProteinID:
XP_039274723
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MEKDSVCDVIPKFNQEKPLVWIEYPGIVKDADKMLKTLGGQKNISGTYREENKRIDLRFR
PDDPCCHAVCGDRKEVNALLLNVKKYRRKKSPNNNSSADEFRYRPELVGVVETAYKFNAL
CDFQYLPLHNDVENDKLVNMIPHLKVNNLDDAAYTNEVPLFLPPATFSRFDQQLDVLFRS
VPKYNQSHGNPNKIGITRPRRIHFAQYLKYEENWTPKEPLPAAQEVLEKIKKTEEGLVQG
IKDLFEKRPIWSKNAIRCILQCSGXRLKFLLPALAYYFITGPWRSLWVKFGYDPRKDPGA
AEYQLLDFRVRQGLNTPHIPIKAKRSTLSYRLPNLMPRSKLESNIVNNLDEKSTASSSYS
KEQTEAMYIFKSGVLPAYRQTFYQVCDILHPXLKDIVQSQTGLSNKCDMKSGWYPKGMAA
KIRDILSQDIQNTISNTEGMEQPIINMERATRKKYKSRVSKSTENFEEPSFQDLLLDLSS
DEEKQSLNEEVGDSGSEQEEILSDNDAEVMDDVELNEEEDENLEDDNTLKDSNNFVDLSQ
PYFNEELTDFLDDFEAFSPDDFDDNIEDN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagattctgtttgtgatgtcatacctaaatttaatcaggagaaacctcttgtc
tggattgaatatccaggaatcgttaaggatgccgacaaaatgctaaaaacactcggagga
cagaaaaacatttctggaacatatagagaagaaaacaaacgtattgatttacgatttcga
ccagatgatccttgttgtcatgctgtatgtggcgatcgcaaagaagtaaatgcgttatta
ctaaatgtaaagaaatatagacggaaaaagtctccaaacaacaattcaagcgcagatgag
tttcgctatcgtccggaacttgttggtgttgtagagactgcttacaagttcaatgctctt
tgtgattttcaatatcttcccttacataatgatgtggaaaatgataaactagtgaacatg
ataccgcatcttaaagttaataatcttgatgacgctgcatacacaaatgaggtaccactt
tttcttccgcctgctacgttcagtcgttttgaccaacaactagatgtgttatttagaagt
gtaccaaaatataatcagtcgcatggaaatccaaataaaatcggtattactcgaccgcgg
cggattcactttgctcaatatcttaaatatgaggagaattggacccccaaagaacccttg
cctgcagcacaagaagttttggaaaaaattaagaaaactgaagaagggctagtgcaaggg
attaaagatctttttgagaaacgtcccatatggtctaaaaatgcaattagatgtatacta
caatgtagtgggnaacgacttaaatttctattgcctgcattggcttattattttatcaca
ggtccctggcgttctttatgggtcaaatttggatatgatcctagaaaggacccaggagcc
gcagaatatcagcttcttgacttccgagttagacagggattaaacactccacacatacca
atcaaagcaaaacgtagcaccctttcttacagactaccaaacctgatgccccgatctaag
ctcgaatctaatatagtaaataatttagatgaaaaatctactgcatcctcttcttatagc
aaagagcaaacagaagctatgtatatcttcaagtctggtgtacttccagcatatcggcaa
actttttatcaagtatgtgatatactccatcctnncctaaaagatatagtgcaaagtcaa
acaggattatctaacaaatgtgacatgaaatcaggatggtatcccaagggtatggctgca
aaaataagagacattttatcacaagatattcaaaatactatatcaaatacagaaggaatg
gagcagccgataataaacatggaaagagcaaccagaaaaaaatataagtctcgggtatct
aaaagcactgaaaattttgaggaaccttccttccaagatcttctattagatttatctagt
gatgaggagaagcaaagtttaaatgaagaagttggggattctggtagtgagcaggaggaa
attttatctgacaatgatgcagaagttatggatgatgttgaactaaatgaagaggaagat
gaaaatttagaagatgataacacgttaaaagattctaataattttgttgatctcagtcaa
ccatatttcaatgaagaattaacagatttcttagacgatttcgaagccttttcgccagat
gattttgatgataacattgaagacaattga
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