Styela clava (leathery sea squirt): 120348636
Help
Entry
120348636 CDS
T07291
Name
(RefSeq) retinoic acid receptor alpha-A-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120348636
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sclv03310
]
120348636
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120348636
Nuclear receptors [BR:
sclv03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120348636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120348636
NCBI-ProteinID:
XP_039274750
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MSQLSPGQEAAITILQQQESSKVQERLSPSTRIFHPNILVKSTSNFPTSQQTTVNTLSPS
PVNYGTSMMPQTPPNCLPVTSSPYFPILPQTSSNMISQSANAAALGIPMYCSGASGLVPD
HHGVLLNVAARALTAAFMPLTMNTGARLPISSDLMQRHLPLVMPHHTTSPVTSPDMLMSN
MHRRDSEYTMDGTGCSGPKRIRKESADSTSNISHSSSSSPTNVHPHLVKSPPVQYLHHHD
LSLQRRKFYSTLPGEPNQYAKQNGDTNNNRLSQLNETHSGVNGRRSSSEKNRASPDSAGL
SSASSSASGSESEAIVPHYVQPPSPPPPPRVYKPCFVCGDKSSGYHYGVASCEGCKGFFR
RSVQKNMQYTCHRNKNCVINKSTRSRCQYCRLQQCFQVGMLKESVRNDRNKKRGKEKEGK
PGETSPSGNNGQTTEEVVVTPEIENIVQVVSKAHLDTFPLSETLQKYDCKKNGEAAPPKM
PPVVKPPSPEADTKPPGGAGGLDLWLWSKFSDLSTKSIIKIVEFAKIVPGFTDLTIADQI
TLLKSACLEILFFRICSRYDATKDTMSFSDGLTLTRTQLRNCAFGPMTEQVFGFAQSLTP
FELDHTEGGLLCAICLICADRPELEQPEKVEELQEPLVEGLKWYARKRRPNKPHVFPKML
MKIADLRCIGFKGADRAASIRSELPKSAMPPLMSEMLVDEENEEK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaactctcaccggggcaggaggccgctattactattctacaacaacaagagtca
agcaaagttcaagaacgactatctccatctacaagaatatttcatcctaatatattagtc
aagtcaacctctaactttcccacaagtcaacaaacaactgtcaatacactgtcaccttct
cctgtcaactacggcaccagtatgatgccgcagacaccaccaaactgtttgcctgtcacc
tcttcaccttattttcctattttgccacaaacatcttccaacatgatttcacaaagcgca
aatgctgctgcacttggaataccaatgtattgttctggtgcgtcaggacttgtaccagat
caccatggcgtattactaaatgtagcagcaagagcactcacagcagcttttatgcctctc
acaatgaacactggtgctagattaccgatctcctccgacttaatgcaaagacacttacct
ttggtgatgcctcatcatacaacctctcctgtcacaagtcctgatatgctgatgtcaaat
atgcatagaagagattcagaatacacgatggatggcactggatgttctggccctaagagg
ataagaaaagagagtgctgattcaacgtctaatatcagtcacagttcatcatcatcgccc
actaatgttcatccacatctcgttaaatctcctcctgtgcaatatctacaccatcatgat
ctctcattacagagaagaaaattttattcaaccttgcctggggaacccaatcagtacgcg
aagcagaacggtgacaccaataacaaccgactgtcacaactaaatgaaacacattctggg
gtaaatggtcgaagaagcagcagtgagaaaaatcgagcgtctccagacagcgctggacta
tcctctgccagtagcagtgcttcgggatcggaatctgaagctattgtgcctcactatgtt
cagcctccatcacccccgcctccaccaagagtctacaagccttgctttgtatgtggagac
aaatcgtccggttatcattatggagtcgcttcttgcgaaggatgcaagggcttctttcgt
agatcagttcaaaagaacatgcagtacacttgccacaggaataaaaattgcgttatcaac
aaatcaacccgaagtagatgtcagtactgtcgtttacaacaatgctttcaagttggaatg
ttgaaagaatccgttcgtaacgatagaaacaagaaacgtggaaaggaaaaggagggaaag
cctggcgagacatctcccagtggaaacaacggacagacaaccgaagaagttgttgtgacg
ccagagattgaaaatattgtacaagttgtatcaaaagctcatttggatacttttccgctg
agtgaaacgctgcagaaatatgattgcaaaaagaatggcgaggccgcccctccgaagatg
ccaccagttgtaaagcctccttcgccagaagccgacacaaaaccgcccggtggggcaggt
ggtttggacttgtggctctggagcaaattctccgatctctctacaaaatcgatcatcaaa
attgtcgaatttgcaaaaattgttcctggatttaccgacctcactattgctgatcagatt
actttactcaaaagcgcttgcctcgaaattttgttctttcgcatctgtagtcgttatgat
gcaacaaaagacacaatgtcattttccgatggtcttactttgaccagaacacaactccgg
aattgtgcatttggacccatgacagaacaggtcttcggattcgctcaatctctcacaccg
tttgagctcgatcacaccgaaggaggattgttatgtgcgatttgcttgatatgcgcagat
cgtcctgaactggaacagcctgaaaaagtggaagaactgcaagagccgttagtcgaaggt
ttaaaatggtacgcccgtaaacgccgtccaaataaacctcatgtgttcccaaaaatgttg
atgaaaattgccgacttgagatgcattggttttaaaggtgcggatagagcggcttccatc
agaagtgagctcccgaaaagcgccatgccgccattgatgtccgaaatgctagtcgatgag
gagaacgaagaaaagtga
DBGET
integrated database retrieval system
