Styela clava (leathery sea squirt): 120348682
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Entry
120348682 CDS
T07291
Name
(RefSeq) integrin alpha-1-like
KO
K06480
integrin alpha 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04512
ECM-receptor interaction
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120348682
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120348682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120348682
04515 Cell adhesion molecules [BR:
sclv04515
]
120348682
04090 CD molecules [BR:
sclv04090
]
120348682
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120348682
Cell adhesion molecules [BR:
sclv04515
]
Integrins
Integrin alpha subunits
120348682
CD molecules [BR:
sclv04090
]
Proteins
120348682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
VWA_3
DUF5061
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
120348682
NCBI-ProteinID:
XP_039274816
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MAMMGVFIFLSSILLQSSLISCENVETRIHTLMTPKTPKVDFGRSVHGTVRSVYASAPDL
GPSGGMYKCEYDVTNPTTNDTFVCPTEISFGTENATTGTSLEKVTVSGHEYFITCGNQYH
FTCPKLQIQERMIGECYTYKVSGGSISTIPSPCPIACPQGISANIVFVIDGSGSVGAGNF
GEGLKWIVNVLKKFSYDINLGNIHVGFVPFNGGVYEASSSLAAGTFYDFRDKALGIGYHR
GGTNTPQAITTATNLLMSSTARTKVAKLMITMTDGGSTSGSPDASAAAAETNGITMIAVG
IGSGIKYSELREIARHSSRILSVTDYSKLDGIIDTLSKVIEETAKGSLEGGSSNSTTEMT
NCQFGSSIHASKNGLYIGAIGSYDRTGTVAEYNSLTNFPNLRSSGHLNATEMANNLNGVN
ATDLKESYFGYSVSSGTFTVDGREWVVMSAPRYLLKGMVLIYRETPTKSFYQLHPNDKFW
QLGAYYGQSVLAMDIDNDNEDDLLVSSPLYSKLGGYDEGVVFVYMSKTNSISKWASSDFS
PLVLEGDSIQGARFGMNLVDGGDIDKNGINDVIISSPSEGDEGSNTPSGSIYIYFSSSTG
LSNSRKQKVFGRTVTSNTQSLRAFGWSTYGGSDYDKNGYPDVVVSAPSSNRLIVLWSRKI
ITITPSISIGQTSIDVKHCAANPTTACSNITVCLNAKYEDGTEVSKTFEITYNVTLDSLT
AANKRLRFKDQSASIISETLRVGRTEICNYYDVALKIESLGTLSGGGGFQVTPRAELSVG
LSDSHKIKVMSGVLSSSSQVRMTSDWSFKKGCSGINERCEHDLQLNVTSDTSSKSLLLLT
DKSQKLKLHVTIENLGPDHAYFTRINVTSGNLTLNLVNGSCVTSDDEARDSSKGLAVIKF
ESHRAGLKDLMVSGDKCEFTLEFDFTRMKSTANEGNYNIQGVIYSTAGDDNITLDGNSAN
NRFSIQGSVQYQSSISITELSIPESIYFNRTSTDTTVVKTLEDEALAGNKTKLVHQYTLY
NRGPLGFAKGRVKLTWPEYTQNGLYLLYLVGIKCKPESACTCDATGKANKFNLAPKMNSN
ETYENVTITYPDDSQAFGAIKTVTCANSKCSEVYCDLDYISRFGNIIVLAEFKPWIPTFG
KEFSNTQIFSTLDLIVSNISSDQQSTNQKVTTELSTSPWYKEPTKNPLEWWQILLAILGG
ILLLVVAVLAMWKLGFFESKYKKRTRAGRQSIREREAAGPSDFDEGPSYENVGEGPSYEN
VDADAGMGQSTADLVNVDI
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatgggggtgtttatatttctctcgagtattctgcttcaaagttctctcatc
tcttgtgaaaatgttgaaactcggatacacactttgatgacgcccaaaactcccaaagta
gattttggaagaagcgttcacgggacagttcgcagtgtttatgcaagtgctccggacctt
ggcccatcaggcggaatgtataaatgtgaatatgatgtgacaaaccctacaaccaatgat
acatttgtatgcccaactgaaatttctttcgggaccgagaacgctaccacaggcacatcg
ttggaaaaggttaccgtttcaggacacgaatattttattacttgtggcaaccaataccat
tttacttgcccaaaactgcaaattcaagaacgaatgattggagagtgttacacttataaa
gtttccggagggagtatttctacaattccgtcaccatgtccgatagcttgtcctcaaggt
atatcagcaaatattgtgtttgttattgatggttccggcagtgtaggtgcaggtaatttt
ggggaaggattaaagtggattgttaacgtattaaaaaagtttagctacgacattaatttg
ggaaatattcacgttggatttgtcccctttaatggaggcgtctatgaagcaagctcttca
ctggcagcaggaactttctacgatttcagagataaggcattgggcataggttaccatagg
ggcggaacaaacactccacaagctatcacaactgccaccaatctactgatgtcatcaact
gccaggacaaaagttgcaaaattgatgataacaatgactgacggagggagtacttcaggt
tcgccagacgcatcagcagcagctgccgaaacaaatggcattacgatgatagctgtcgga
attggaagcggaataaaatatagcgaattgcgtgaaatagctagacatagctctcgaatt
ctcagtgtgacggattactctaaattggatggaatcattgacacattaagtaaagttata
gaagaaactgcgaaaggaagtttagaaggcggttcgagcaactcaactacagaaatgaca
aattgtcaatttggatcgtcgattcatgcatcgaagaatggtctctacatcggagccatt
ggttcttatgacagaacaggaacagtagcagagtataatagccttacgaatttccccaac
ctgaggtcaagcggtcatttaaacgcaacggaaatggccaataacttgaacggagtcaat
gcaactgatttgaaagaatcatattttggttattcggtttccagtggaacttttactgtg
gatggccgagaatgggtagtaatgagtgctccaagatacctcttgaagggaatggtccta
atttaccgagaaacgcctaccaaatcgttctatcaacttcatccaaatgataagttctgg
caacttggagcttattacggtcagagtgttttggcaatggatattgacaatgataatgaa
gatgaccttctcgtctcttctcccctgtattcaaaactaggcggatacgacgaaggagtg
gtgtttgtgtacatgagcaaaactaattctatttctaaatgggctagttcagatttttct
ccattagtattggaaggagacagtatccaaggagcgagatttgggatgaatttagttgac
ggaggcgacatagataaaaatggaatcaatgacgtcatcataagctctccatccgaggga
gatgaagggtcaaacacacctagtggatcgatttatatttacttctcgtcgtcaaccgga
ctttcaaattccagaaagcagaaagtatttgggcgaaccgtcacctcgaacactcaatct
ctgcgtgcatttggttggagtacttatggtggttctgactatgacaagaacggttatccg
gatgtcgtggtgtcagctccttcaagcaatagattgattgtgttgtggtctcgtaaaatc
attactattacaccaagtatttcaatcggacaaacatcaatcgacgttaaacattgcgca
gcgaatccaacgacggcatgttctaatattactgtttgcttgaatgctaaatatgaggat
ggaaccgaagtttcaaaaacatttgaaataacgtacaacgtcactctcgattccctaacg
gcggcgaacaaacgacttcgtttcaaggatcaatcggccagcatcatttctgaaacattg
cgagtaggaagaacggagatttgcaattattatgacgtggcattaaagatagaatccttg
ggaacgttgagtggaggaggcggttttcaagtaacaccacgggctgagctcagtgtggga
ttatccgatagccataagataaaagtgatgtccggagtgttgagctctagcagtcaagtc
cgaatgacatctgattggtcttttaagaaaggatgttctggaataaatgaacgctgtgaa
catgatttacaactcaacgttaccagcgatacatcgtcgaaatcgttactactcctcact
gacaaaagtcagaaattaaaacttcatgttacgatcgaaaacttgggacccgatcatgct
tactttacccggatcaacgtaacttcagggaatttgactttaaatttggtgaatgggtcc
tgtgtgacatcagacgacgaagcacgtgattcttcaaaaggattggcggtgattaaattc
gaatcccacagagctggtctcaaagacttgatggtgtcaggagataagtgcgagttcacc
ttagaatttgactttaccaggatgaaatcgacagctaatgaaggaaactacaatatccag
ggagtgatatattcaacggccggagacgataatattacacttgatggaaattcagccaac
aataggttcagcattcaaggatctgtgcaatatcaatcctcgatatctattactgagctt
tccattcctgagagcatttacttcaatcgaacctcaaccgacacaaccgttgttaaaaca
ctagaagatgaagcattggccgggaacaaaacgaaattagttcatcaatatacgttatac
aatcgtggaccacttggatttgcaaaaggtcgtgtcaaacttacatggcctgagtacact
cagaatggattgtatctactttatttagttggcataaaatgcaagccggaatcagcgtgt
acgtgcgatgcaacaggaaaagcaaataaattcaatcttgctcctaaaatgaactcaaac
gaaacttatgaaaatgtaaccataacttatcccgatgatagccaagcgttcggggctata
aagacagttacgtgtgcaaacagcaagtgcagcgaagtttattgtgatctggactacata
tctcggtttggaaacatcatcgtgttagccgaattcaaaccgtggattccaacatttggg
aaggaattttccaacactcaaatattcagcacattggatttgattgtatcaaatatctca
tcagatcagcaatccacgaaccagaaggtcacgactgaactctctacttctccatggtat
aaagaacccactaagaatcctttagaatggtggcagattctactagcaatactcggtgga
attttgttgctggttgtagcagtattagctatgtggaagcttggcttctttgagagcaag
tacaaaaagagaaccagagcaggcagacagagcattcgtgaacgcgaagcagctgggcct
tcagattttgatgaagggccgtcatacgaaaatgtcggtgaaggaccgtcatacgaaaat
gttgatgcagatgctggaatggggcaaagtactgccgatctggtgaacgtggatatttaa
DBGET
integrated database retrieval system