Schizophyllum commune: SCHCO_01125396
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Entry
SCHCO_01125396 CDS
T01331
Symbol
SCHCODRAFT_01125396
Name
(RefSeq) Piwi-domain-containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_01125396 (SCHCODRAFT_01125396)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_01125396 (SCHCODRAFT_01125396)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SCHCO_01125396 (SCHCODRAFT_01125396)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SCHCO_01125396 (SCHCODRAFT_01125396)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SCHCO_01125396 (SCHCODRAFT_01125396)
microRNA pathway
RISC loading complex
SCHCO_01125396 (SCHCODRAFT_01125396)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL1
ArgoL2
PAZ
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9596351
NCBI-ProteinID:
XP_050200020
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MAPKGRRNQKGTSVPKVVAQPELAPQQTGIADAPVTAIGEKRPGFGYAGTKENNDVNMFE
LTLKRGTIYHYDVDMVNDKPLPVRRGLELFARLQEVSPNIFTQKVVFDGRKNMYSSYRLD
VPDNSKEFEITVSPRNETRPARIRIVKIKLVKEINPESLLRFTQGKQSFDEEAQTTLQAL
NVALRMEPMQNLPFNTRSFFTPIGKKALPGGLELWRGYFQSVRPVIDKLVANVDISTAIM
YQTGSLISLCLKHLNLPLDNPSALADLDTRRSYSLKRFLSGLRVTTTGGQTAQRLPRAIT
GLRREGASKTMFNLRRDGEPDTTISVAEYFKKLGRPLRYPALPCVEVSSGKALLPLEVCD
VPEGQSWRGQIAPELTAEMVKFSTLNPTARFNAIQRGREVLGYDRSEWLQQFGITISKTP
IQVESRTLAAPIMQYGIKPGLRQQAENMIPTGGAWNVKGKRFFKPMPLNSWAVLVVEDKS
RFPLDALKSLIIGLKKEAANYGMLPVNDPVLSEHVSPQQSVTKRLEELPARLRANKLPLP
QIVFFVLPFNGDERWTEVKQYARSHLNRGMFTNGPAAEATSLFSGVATQCLKAQKSAHAN
SQYWANVCMKINAKLGGINVIIKPGDPSNLLADRTKPTLVLGADVIHPSPGAVGQSSYAA
MVGSVDPDAAKYRATSREQTSRQELIDDFEDMAKELIQAYMDARKQEGKSAGASKPTRIF
FYRDGVSEGQFKQVKDEELQKLRAACRSLEVTAKITFIIATKRHNTRLNPLGTKDRSGNA
PAGSVIDTNIVDPVEFDFYLQSHAGIQGTSRPVHYWVLRDENNLSADALQRFTYNLCHVY
ARATRSVSIPAPTYYADIVCARAKTHYKYRNDHSVPSGEPTEANEQARFQQVHPRQKGHM
YYQ
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaaggccgtcgtaatcagaagggaactagcgtacccaaggtcgtagcccag
ccggaacttgcaccgcagcaaacgggaatcgcagatgcgccggtcaccgccatcggcgag
aagcgccccggctttgggtacgcggggacgaaggagaacaacgacgtgaacatgttcgag
ctcacgctcaagcgtggcacgatctatcactatgacgtagacatggtcaacgacaagcct
ctgcccgtccgtcgcggcctcgagttgtttgcccgcctccaggaagtgtcccccaacatc
ttcacccagaaagtcgtgttcgacgggaggaagaacatgtactcctcctaccgtcttgac
gtccccgacaactccaaagagttcgagatcaccgtaagtcccagaaacgagacccggcca
gcccgtatccgcatcgtcaagatcaagctcgtgaaggagatcaatcccgagtcactcctc
cggttcacccaaggcaagcagtcgttcgacgaggaagcgcaaacgacccttcaggctctc
aatgttgccttgcgcatggaaccaatgcagaatctccccttcaacacacgcagcttcttc
acccccattggcaagaaggcgttgcccggaggactcgagctatggagaggatacttccag
tccgtacgacctgtcatcgacaaactcgtcgccaacgtcgacatctcaaccgctatcatg
taccagacgggctcgttgatcagtctatgcctcaagcatctcaacctccctctcgacaac
ccatccgccctagcagatctcgacactcgtcgatcgtactctctcaagcgcttcctcagc
gggctaagggttactactaccggaggccagacggcccagcggttgcctcgcgcgatcact
gggctccggcgagagggcgccagcaagaccatgttcaacctcaggcgcgatggggaaccc
gacaccaccatttccgtcgccgaatacttcaagaaactcggccggcctctgcggtaccct
gccctgccctgcgttgaggtctcgtcgggcaaggcgcttctgccacttgaggtttgcgac
gtgccggagggacaatcttggcgtggtcaaatcgcacctgaactgacggccgaaatggtc
aagttctcgacgctcaaccccacagctcgcttcaatgcgattcaacgcggtcgggaggtc
cttggatacgatcggagcgaatggcttcagcaatttggcatcacgatcagcaagacgccg
attcaggtcgaatcgcgcacgcttgctgccccaatcatgcaatacggaatcaagcccggt
ctccgccagcaggctgagaacatgattcctacgggaggcgcttggaatgtgaaggggaag
cgattcttcaaaccgatgccgcttaactcgtgggctgtcttggtggtcgaggacaagtca
cgcttcccgctcgatgccctgaaatccttaatcatcgggctcaagaaggaagctgcgaat
tacggcatgctcccagtcaatgaccccgttctgtcagagcatgtctctcctcagcaaagc
gtaacaaagcgtctagaagaacttcctgctagattgcgtgcaaataagctgccactgcca
cagatcgtcttttttgtcctccccttcaacggtgacgagagatggactgaggtcaaacag
tatgcacgaagtcatctcaaccgcggaatgttcactaacggtcctgcagctgaggcgaca
tcgttgtttagcggtgtggctacgcaatgcctgaaagcgcagaagagtgcacacgctaat
tctcagtactgggccaatgtttgcatgaagatcaacgccaaactcggcggcataaatgtg
atcatcaaacccggagacccttcgaacctcctcgccgaccggaccaaaccgacgctggtc
ctcggcgcggacgtcatccaccctagcccaggcgctgtcggtcaatcgtcgtatgcggcg
atggtaggtagcgtggatcctgatgcagccaagtaccgtgccaccagccgggagcagacg
tcgcgccaggaactcatcgacgacttcgaggacatggcaaaagagttgatacaagcgtac
atggacgcaaggaaacaagagggaaagtcagccggagcgagtaaaccaacgaggatcttc
ttttaccgcgacggtgtctccgaaggtcagttcaagcaagtgaaggacgaggagctacag
aagctacgagccgcatgccgctcgctggaagtgacagccaagatcacgtttattatcgcc
acaaagcggcacaacacgcgcctgaatcctttgggcactaaagacaggagcgggaatgcg
cctgcgggcagcgttatcgatactaacatcgttgatcccgtcgagttcgacttctacctg
caaagtcacgcgggaatccaagggacgagcaggcccgtgcattactgggtccttcgcgat
gaaaacaacctcagtgctgacgctctccaacgcttcacgtacaacctctgccacgtctac
gctcgagcgacgcgcagcgtgtcgattcccgcgccaacctattacgccgacatcgtgtgt
gcacgcgcgaagactcactacaagtaccgcaacgaccattccgttccatccggagaaccc
acggaggcgaacgagcaggccagatttcagcaggtacaccctcggcagaaggggcacatg
tactatcagtga
DBGET
integrated database retrieval system