Schizophyllum commune: SCHCO_01166149
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Entry
SCHCO_01166149 CDS
T01331
Symbol
SCHCODRAFT_01166149
Name
(RefSeq) DNA replication factor C, large subunit
KO
K10754
replication factor C subunit 1
Organism
scm
Schizophyllum commune
Pathway
scm03030
DNA replication
scm03410
Base excision repair
scm03420
Nucleotide excision repair
scm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHCO_01166149 (SCHCODRAFT_01166149)
03410 Base excision repair
SCHCO_01166149 (SCHCODRAFT_01166149)
03420 Nucleotide excision repair
SCHCO_01166149 (SCHCODRAFT_01166149)
03430 Mismatch repair
SCHCO_01166149 (SCHCODRAFT_01166149)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_01166149 (SCHCODRAFT_01166149)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_01166149 (SCHCODRAFT_01166149)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SCHCO_01166149 (SCHCODRAFT_01166149)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SCHCO_01166149 (SCHCODRAFT_01166149)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_30
nSTAND3
AAA_19
Rad17
AAA_22
AAA_18
AAA_16
AAA_assoc_2
RuvB_N
AAA_5
NTPase_1
Motif
Other DBs
NCBI-GeneID:
9588165
NCBI-ProteinID:
XP_003036742
UniProt:
D8PS15
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MAIQTKPKPSTSKVRPSGPISTTAPNRVQANAITIDSDSEDEKPVKRSAGVKRKKPAVLD
SSDDEDEAEPTPPKKKSAVAPTNKSGSSKAKPRPSAVAKPKAKPKAKKDEDYEMDSPSES
EAEPDVKPPKKASPQKKAAAPRKSAAKAPPPADDEKPVKKEEACADKEYSWAAMKAARLA
GPSAPGSKEVPDGAPNALAGLAFVFTGELSAFSRDEAVELAKRFGGRVTGQPSGKTDYVV
LGDNAGDSKLRAIKKHGLKTLNEDEFLALVGSRNKDGKMKVDEKTRKKMEKEQADIEKAA
AELAALLVFFLGEKGDDADRVSCSGPKGVDPSMQLWTSRYAPQSLKEICGNKAGVDKLLQ
WLNDWSGSLACGFKKPGKNAMNTYRAVLITGSPGIGKTTSAHLCAKLAGFTPVELNASDA
RSKKLVENGMNINNTTIDKWYQGKGAVNTDGVTITDRSCLIMDEVDGMSAGDRGGVGALN
ALIKKTKIPIICIANDRNAQKLTPLKGTCFNLPFQKPQVQAVRSRVLTIAFKEKMKIPAN
VVDQLIQGSQSDIRQVLNMMSTWKLSSNTIDFDQGKALVKANEKYAMMTPFDITHKILGP
YMFSATARETLNDKMELYFQDFSFMPLFIQENYLKMSPARVRNLDGPEKEMKLMKLMERA
SMAVSDGDLVDALIHGPEQHWGLMPLHAVCSTVRPAYEMYGSGGGYGSPNQVSFPQWLGQ
NSKQNKLARQLSDVQIRMRLKVSGDKPEIRQSYIPHLFPHIVQPLMDEGASAVDEVIEYM
DEYFLSREDWDTIVELGVGPHKDEDVLKKISTQTKSAFTRKYNAGEHPIPFHKATDLGKA
PKKLPGGPAPDIEDAFEVRVVR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctatccagactaaacccaagccctcaacgtccaaagtgcgtccatccggccccata
tcgacgacggcgcctaatcgcgtgcaggccaatgccattaccatagactccgattccgaa
gatgagaagcctgtgaagaggtctgctggcgtgaaacgcaagaaacccgccgtacttgac
tctagcgacgacgaagacgaggccgagcccacgccgccaaagaagaagtccgctgttgcg
cccacaaacaagtccggctcttcgaaggctaagccaagaccatctgcagtggctaaaccg
aaggcgaagcccaaagcgaagaaagatgaggactacgagatggactcgcccagcgagagc
gaggccgagccagatgtcaagccgcccaagaaagcgtcaccacagaagaaagcagccgct
ccacgcaagtccgccgccaaagctccaccaccagctgacgacgagaagccagtgaagaaa
gaagaggcatgtgctgacaaggaatacagctgggcggctatgaaagctgcaaggttagca
ggcccttcggcgccaggctccaaggaagtgcccgatggtgcaccaaacgcacttgcgggg
ctcgccttcgtcttcaccggcgagctctccgccttctcgcgcgacgaggccgtcgagctc
gctaaacgcttcggcggccgcgtcaccggccagccctccggcaagactgactacgtcgtc
ctcggcgacaacgccggcgacagcaagctgcgcgcgattaagaagcacgggcttaaaacc
ctgaacgaagacgagttcctcgcgctcgtcggctcgcggaacaaggacgggaagatgaag
gtggacgagaagacgcggaagaagatggagaaggagcaagcggatattgagaaggcggcg
gcggagctggctgcgttgttggttttctttttgggagagaaaggggatgatgctgaccga
gtttcgtgcagcggccccaaaggtgtcgacccaagcatgcagctttggacatcacgttat
gcgccgcaatcgctcaaggagatctgcggcaacaaggccggcgtcgataagctgctgcaa
tggctcaacgactggtcaggaagtttggcatgcggattcaaaaagcctggcaagaatgcc
atgaacacctaccgggccgttttgattacagggtctccgggtattgggaagaccactagc
gcgcatctgtgtgccaagttggctggctttacccctgttgagctcaatgcaagcgatgcg
aggagtaagaagttggttgagaacggcatgaacatcaacaataccacaattgacaagtgg
taccaagggaagggcgccgtcaacacggacggagtcactatcacagataggagttgcttg
atcatggacgaggtggatggcatgtccgctggcgacagaggaggcgttggtgctctgaac
gccctgatcaagaagactaagatccccatcatctgcatcgccaacgaccgaaatgcgcaa
aagctaacccccctcaaagggacgtgcttcaacctgcccttccagaagccacaagtgcag
gctgtccggtcacgcgtgctcaccatcgccttcaaggagaagatgaagataccggcgaac
gtcgttgaccagctcatccagggctcccagtccgatatccggcaagtcctcaatatgatg
tccacctggaagctctccagcaataccatcgacttcgaccaggggaaggcactcgtcaaa
gcgaacgaaaaatacgccatgatgacccccttcgatatcacgcacaagatcctcgggccg
tacatgttctccgcgaccgcgcgcgagaccctcaacgacaagatggagctgtacttccag
gacttctccttcatgccgctcttcatccaggagaactacctgaagatgagcccggcgcgg
gtgcggaatctggacgggccggagaaggagatgaagttgatgaagctgatggagcgggcg
tcgatggcggtgtcggatggggatttggtggatgcgttaattcatgggccggaacagcat
tgggggcttatgccgttgcatgcggtgtgctcgactgtgcgcccggcgtacgaaatgtac
ggctcgggcgggggatatgggtcgcctaatcaggtttcgttcccgcaatggctcggccag
aactccaagcagaacaagctcgcgaggcagctgagcgatgtacagatccgcatgcggctg
aaggtgtcgggcgacaagccggagatacgacagtcgtatattccacacctgttcccgcat
atcgtgcaaccactcatggatgagggagcgagcgccgtcgatgaagtcatcgagtacatg
gatgagtacttcctctctcgcgaggactgggacaccatcgtcgaactcggcgttggcccg
cacaaggacgaggacgtgctcaagaagatatcgacgcagacgaagtcggcattcacgcgc
aagtacaacgccggcgagcatccgataccattccataaggcgacggacttggggaaggcg
ccgaagaagctaccagggggccctgcaccggatattgaggatgcgttcgaggtgcgtgtt
gtccgttga
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