Schizophyllum commune: SCHCO_01200004 Help Entry SCHCO_01200004    CDS       T01331                                  Symbol SCHCODRAFT_01200004 Name (RefSeq) uncharacterized protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism scm  Schizophyllum commune Brite KEGG Orthology (KO) [BR:scm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:scm03021]     SCHCO_01200004 (SCHCODRAFT_01200004) Enzymes [BR:scm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      SCHCO_01200004 (SCHCODRAFT_01200004)     5.6.2.5  RNA 5'-3' helicase      SCHCO_01200004 (SCHCODRAFT_01200004) Transcription machinery [BR:scm03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      SCHCO_01200004 (SCHCODRAFT_01200004) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 UvrD-helicase AAA_23 DEAD AAA_22 GP24_25 nSTAND3 PAX DUF6026 Nuf2_DHR10-like Motif Other DBs NCBI-GeneID:  9586375 NCBI-ProteinID:  XP_050201655 LinkDB All DBs Position Unknown AA seq 1941 aa AA seqDB search MADGEIANLLADVRAEPAKYNKPSDTVLGAIFGLVVKTGPSEPSQIHWFCSQASETLSEA ATFLIRLFAYNSPLVETWKAQYSLCVNECVQCALGVEIAKTRARSIYMSSFPPDTLVNFF TLLEGWELSNVISELCQRNILNGQNVVASPTLYGVPIGLTYRMVANLVVFRDPRIRAALE KCHASIPLDKWPTDPLPAGMLALLVDENAALREWAEERYSALKHKPIPPDSLTFAHTSVA ETIFRALASDSASSSQGEPAAPIRSDIEVYWSGILKIVALMDPELLLHHLRLRVDIRRTV LGHLSDNGPHLHLVLNTFILLLGRLKEKIWQGEGPEYPQVIFDSIKDNPAYVEGMSKALS TSREAAGPYIKWYQPFLVTVEPTPVYGEVIAKMAGLLCEELQHPRFQDSAPATIAIAAQI LEKLVRRHSQTHAAAVASAIDIHVAKLSQVAFAPSFNNDKWALARKTSRSLLFSAVKVDA RTVLAAFDGVYHALAEVSRKIPVKTVIVKHTSREMLWKTICQAVDSRDQDAFAELLTIAY EIAHVDIPTKKAYQEVFTATRPTDSASPKVALEDVSRSLQVMHDCISGALGRYVEDNSAS AALGLLRRESITQRVVSLMMSPVEVLHTGAKDLVGVAFDVDVRSECFRALFKELPDPAFS GALRHLEMFMSFVNKPPEACSLAKMLVRCFTDIIEVLCESPGGLLRSTSYAPASSHSLRR DIPKLWEGMAGSLKYIFRRTPTWARWFENDAMTEWMRDALIFGRDMIAQRETFEGAAAAD KDAKTTDKEAKAADRKFKAKIGQKMLQDMQPVLLDLTKWLRLTDEELLHQTFSFLQSLLS MFESADVRPEEETRQKLDHFVRDALNARDPAKRAGMSERELRNGETRLNNVRLKQLQDSL AAFDEEEVEIVEPPKKPSPAPAPAKPAKKGQSRLTGFISRDTKPSTSAPPKPSKPLARPA PSTVQPPAKKAKVSHRFSEEEQKKIDEDVPMPKMRRAGAVEQQPKAALKNLHFRRKDEGR AASTSSAPVTEEDDSDDDDDGMRDLVKAERRRQPIKKPEPRGIKLLDVPQIDGHIERKLR RGEEDRRRAMRASPPDFSRLHAELLSWDYDHMGDQPPGFEGRLQPVPDRFDNFQHYDRVF SPLLLFECWAQLQQSKNDVMVTENLPCTISSRAYTDRWIDLEVTITRAEDMREFYLAETD IVLLRKVDTRQPLLAKVQSSVTPASNMIATLRCSGAAGVKPENGTAWEMSKVMSLSTIHR EYTALVQVPYYDLPGNILRPNLDNSPSISASEVQRMQEKYSVNEPQAVAITKSIHTKGFS LIQGPPGTGKTSTICGLVSAYLYEANRRITRPMENDPNQPRILLCAPSNAAIDEVAFRLK CSPAAVAGKLNVVRIGAEKAIGDAVKDITLDTLADKKLNVSTTNTENVEGELSSLFRELN AAKHEINAKQKELAQIVDNSARAQTLSDELRMLKSRRHQVSKQVDQMKEVQKNNRRTMDA SRRKARRDVLEEAHVVCSTLSGAGHESLNESEFQMIIIDEAAQAIELSSLIPFKFSCSHC VLVGDEKQLPPTVISMQATKFRYNQSLFVRLQRQSPNAVNLLSIQYRMHPSISALPSKVF YDSRLKDGPDMEAKTKQPWQFDPKFGAYRFFNVFRGVEDRAGAKSSKNIAECEVAVALYS RLVTQFGSSGDFAAKVGIIAGYKGQIVELRRRFENRFGRDITKKIAFNTVDGFQGQEKDV IIFSCVRAGTGTTNIGFMSDTRRMNVALTRAKSSLFILGHADTLSRSDETWKQIVADANE RKLMTDVDVSYFTAPITQTSVPKTPTKKAAPRSRVTSQNAASAPPPANLMTPTALKKSSS KKDLAEAAAKPTSRKDKIDDQPIASSSSSAAPPAQNYAPPAPPRAGEKRRDSGAPPHKPP AKKKKGGPSLFMPKNVQRKNG NT seq 5826 nt NT seq  +upstreamnt  +downstreamnt atggccgatggcgagatagccaacctcctcgcggacgttcgagccgaacccgcgaaatac aacaaacccagcgataccgtccttggcgccatattcggccttgtagtcaagacaggaccg tccgaaccctctcagatacactggttctgctcgcaggcgtcggagaccctcagcgaagcc gcgacattcttgatcaggctgttcgcgtacaatagccctttggtggagacatggaaggcg cagtacagcctatgtgtcaacgagtgtgtgcaatgtgcgctgggggtagagattgcgaag acgcgggcgcgttcgatctatatgtcaagcttccccccggataccctggtcaacttcttc acgctactggagggctgggagctatccaacgtcatatcagagctctgtcagcgcaacatc ctcaacggccagaatgtagtcgcctcacccacgttatatggcgtccccatcggcctcacg tacaggatggtggccaatcttgtcgtcttccgcgatccaaggatacgcgccgctctagag aaatgccatgcgtctatacccctcgataagtggccaacggacccgctcccagccggcatg ctggcgctacttgtagacgagaacgctgcactgcgcgaatgggcggaggagcgctactcg gctctcaagcacaagcccataccgccggatagcctcacatttgctcatacttccgtggcg gagaccatctttagggcgctcgcgagcgactccgcgagctcgagccagggcgaaccggcg gcgcctatacgatcggacatcgaagtatattggagcggcatactgaagatcgtcgccttg atggaccccgagcttctcctgcaccacctacgcctacgcgtggacatccgacgaacagtc ctcggtcacttgtcagacaatgggccacacctccacctcgttctcaacaccttcatcctg ctcctcggccgcctgaaggagaagatatggcaaggcgagggcccggagtacccgcaagtc atcttcgactcgatcaaggacaaccccgcgtacgtcgagggcatgtcgaaggcgctctcg acttcgagggaggccgccggtccgtacatcaagtggtatcagccgttccttgtcactgtt gagccgacccctgtatatggagaggttattgcgaagatggctggcttgctgtgcgaagag ctgcagcatccgaggttccaggactccgcaccggcaaccatcgcgatagcagcacagatc cttgagaagctagtgcgaagacattcgcagacgcacgcagcggcagttgcgtctgcgatt gatattcatgtcgccaagctctcccaagtcgccttcgccccaagcttcaacaacgataag tgggcgttggcgcgcaagacttcgcggtcgcttttgttcagcgcagtgaaagtggacgcg cggaccgtgctggctgcgttcgacggggtgtatcacgcgcttgcggaggtcagcaggaag atacctgtgaagacggtcatagtcaagcatacctctcgcgaaatgttgtggaagaccatc tgtcaggccgtggatagtcgcgatcaggacgccttcgcggagctgctcactatcgcgtac gagattgcgcatgtggacatcccgacgaagaaggcgtaccaggaggtgtttactgcgact aggccgacggactcggcttcaccaaaggtggccctcgaggacgtgtcgaggtcgctccaa gtcatgcacgattgcatctccggcgcactggggcgatatgtcgaggacaacagcgcatcc gccgccctcggtctcctacggcgtgagagcatcacgcagcgcgtcgtctccttgatgatg tcccccgttgaggtgctgcacaccggcgcgaaagacctcgttggcgtggcgttcgatgtt gacgtacgctcggagtgcttccgcgccctctttaaagagcttcccgacccggcattctca ggcgcgctccggcacctcgagatgttcatgtcattcgtgaacaaaccacccgaggcgtgt agtctggcgaaaatgctcgtgcgctgcttcaccgacatcatcgaggtgctgtgcgagtcg cctggcggccttctgcgttccacatcctacgcaccggcttcaagtcatagcctgcgccgc gatattccgaaactgtgggagggcatggcggggtcgctgaagtatatcttccgccggacg ccgacgtgggcgcggtggttcgagaacgatgcgatgacggagtggatgcgcgatgcgctc atctttgggcgggacatgatcgcgcagagggagacctttgagggcgctgctgcggcggac aaagacgcgaagaccacggacaaggaagcgaaggccgcggacaggaagttcaaagccaaa atagggcagaagatgctgcaggacatgcagcccgtgctgctcgacctaaccaagtggctg cggctgacggacgaggagctgctgcaccagacgttctcgttcctgcagtccttgctatcg atgttcgaaagcgcggacgtgcgtccggaggaggagaccaggcagaagctagaccatttc gtgcgggatgcactcaacgcgcgcgatccagcgaagcgagcggggatgtcggagagggag ctaaggaatggggagacgaggctaaacaatgtgcgcctgaagcagctgcaggacagtctg gcggcgttcgacgaggaggaggtggagattgtcgagccgccgaagaaaccgtcgccagca ccagcaccagcgaagcccgccaagaaggggcagtcccgcctcactgggtttatctcgcgc gacacgaagcccagtacatctgcgcctccgaaaccgtccaagccgctcgcgcgtccggcg ccgtcgaccgtgcagcctcctgcgaagaaggcgaaggtttcgcatcgcttcagcgaggag gagcagaagaagatcgacgaggatgtgcctatgcccaagatgcggcgtgcgggtgccgtc gagcaacaacccaaggcggcgctcaagaacttgcacttccgccggaaggatgagggacgc gcggcctcgacctcgtctgcgcctgtcaccgaagaagatgatagcgacgacgacgatgac ggtatgagagacctggtcaaggccgagcgtaggcgccagccgataaagaagcccgagccg cgtggaataaagctcctggacgtgccacaaattgacggccacatcgagcgcaagctacgc cgtggggaagaggatcgtcgtcgcgcaatgcgcgccagtccgccagacttctcgcgcctg catgcagagctgctgtcctgggactatgaccacatgggcgaccagccgcctggtttcgag gggaggttgcagcccgtgccagatcggttcgacaacttccagcactacgatcgcgttttc tcgccgctgctcttattcgagtgctgggcgcagctgcagcagtcgaagaacgatgtcatg gtcacggagaatctgccttgcacgatttcttcgagggcgtatacagatcggtggatcgac ctggaggtgacgattacgcgggcggaggatatgcgcgaattctatctcgcggagacagat attgtgctgcttcgtaaggtcgatacccgacagcccctactggcgaaagttcagtcttca gtgacgccggcaagcaacatgatagcgactttgcgatgttcgggtgcagcgggcgtcaag ccggagaatggcacggcctgggagatgtcgaaagtcatgagcctgtccaccatacaccgt gagtataccgctctggtgcaagtgccatactacgaccttcctgggaacatccttcggcca aatctcgacaacagtcctagcatcagcgcctctgaggtccagcgtatgcaagagaagtac tccgtcaacgagccacaggctgtcgcgattacgaagtcaattcacaccaagggtttctcg cttatccaaggtccacctggtacgggcaagacctcgacgatctgcgggcttgtctccgca tacctgtacgaggccaaccgccgcatcactcgacccatggagaatgacccgaaccagccg cgtattttgctgtgtgctccgagtaacgctgctatcgacgaagtcgcattccgtttgaag tgctcacctgccgctgtcgccggcaagctgaacgttgtacgcataggcgcggagaaagcc atcggtgacgccgtcaaggatatcacccttgacaccctggcggacaagaagctcaacgtc agcacgaccaacacggagaacgtcgagggcgaactctccagcctctttagggagctcaac gcggccaaacacgagataaatgcgaagcagaaggagctggcacagatcgtggacaactct gcgcgcgcgcagacgctgtcggatgagctgaggatgctaaagtcgcgtcgccatcaggtg tcgaagcaggtcgaccagatgaaggaggtgcagaagaacaaccgcaggacgatggatgcg agcaggcggaaagcgcgacgtgatgttctcgaggaggctcatgtcgtttgctctacgctg tctggcgcgggccacgagtccttgaacgagtcggagttccagatgatcatcatcgacgag gcggctcaggctatcgagctgagctcgttaattcctttcaagttttcgtgctcacactgc gtcttagtcggagatgaaaagcagcttccacctacggtcatttccatgcaggcgacaaag ttccggtacaaccaatccttattcgtccgcttgcaacgccagtcgccgaacgcagtcaac ctgctgagcatccaataccgcatgcatccctctatcagcgccttgcctagcaaggtgttc tacgactccaggctgaaggacggccctgatatggaggcaaagacgaagcaaccatggcaa ttcgaccccaagttcggcgcatatcgcttcttcaacgtcttccgaggtgtcgaggaccgc gcaggtgccaagtcttcaaagaacatagcggagtgcgaggttgccgtcgccttgtactcc cgccttgtcacgcagttcggctcttctggggacttcgcggcgaaggtgggcatcatcgcg gggtacaagggccagatcgtcgagctgcggcgtcggttcgagaatcgatttgggcgggat attacgaagaagatcgctttcaatactgtggacggcttccagggtcaggagaaggatgtg atcatattctcttgtgtgagggcgggtactgggacgacgaatatcggtttcatgtctgac actcgtcgcatgaacgtcgcactgacgcgtgcgaagtcgtcgctgttcatacttggacat gccgataccctctcgcggagcgacgagacgtggaaacagatcgtcgcagacgcaaatgag cgtaagctcatgaccgacgtcgacgtgtcgtactttaccgcacctatcacacagacctct gtcccgaagacaccgaccaagaaggcggcgccacgatctcgcgtgacatcgcagaatgca gcctctgccccgccacctgccaaccttatgactccgacggcgctgaaaaagtcgtcgagc aagaaggaccttgcggaggcagctgccaagcccacctccaggaaagacaagatagacgac cagcctatcgcttcctcctcgtcttcagcagcaccaccagctcagaattatgcccctccc gcgccgcccagagcaggagagaaacgaagagacagtggcgcaccacctcataagccgcca gcgaaaaagaagaaaggcggccccagcctgttcatgccgaagaacgtccagaggaagaac ggatga

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