Schizophyllum commune: SCHCO_01209114
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Entry
SCHCO_01209114 CDS
T01331
Symbol
SCHCODRAFT_01209114
Name
(RefSeq) WD40 repeat-like protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_01209114 (SCHCODRAFT_01209114)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
SCHCO_01209114 (SCHCODRAFT_01209114)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_TEP1_C
WDR54
KNTC1_N
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_VPS8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
DUF7310
CFAP43_N
Beta-prop_WDR35_2nd
PEP5_VPS11_N
Beta-prop_LRRK2
B-prop_COPA_B_2nd
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
9585075
NCBI-ProteinID:
XP_003038767
UniProt:
D8PRT3
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MQEIVLCATAASSSSASSSTGPGCIALHDLQTGNSLASFKQTNAPRNSTAILESSGSEGG
FMLSCQPDKSILNVYNFQKDQLAMKIVLPEKLTCIALDPRGHFCAGGTAQGRLYLWEVSS
GILYNAWDGHYRQVTVLRFTRDGAALISGSDDSGVSVWSVSRLVDDDLQNELPLPYTTLS
DHTLPITDITCGVGVFPQLRVLTASVDYSVKVWDLATKSLLTTFTFPQVISCLAWDVAER
FFFAAAPDGSVHQVNLFRDADEKLGIPAEAVGGAGLSDVIRIEDIPAEARRKRLIIVSEP
VSALCISATGALLLVGTTSGPVHVYDIPSHQLLRTITTHKGFTVTHLATMLKPPDLVGHV
SLSMSAGDPKDVVPVRPVAAFQRMRDAKARTAHEVATLLPPRARTADIAYSEDEMLRDHA
FFLQPAQTGSGQQDAVTLQARVTDLEGEVAALREQLGKAKGVNDMMWDNIVQKVVRNRQT
GAHDDGEADEERKRKRGRT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcgtcctatgcgccaccgcggcctcgtccagttcggcgtcttccagtaca
gggcctggatgtatcgcactgcatgaccttcagacgggaaactccctcgcctcgttcaag
cagaccaatgctccacgaaactctaccgccatcctcgaatcttccggctcggagggcggc
ttcatgctctcttgccagccggacaaatctatcctcaatgtctacaacttccagaaagac
caactagccatgaagattgtgcttcccgagaagcttacatgcatagcgcttgaccctcgg
gggcacttttgtgcggggggaacggcgcagggaagattatacctctgggaggtatcctca
ggcatcctatataatgcgtgggatggccactaccgccaagtaaccgtattacggttcacg
cgcgatggcgcagcacttatctcgggtagcgatgactctggagtcagcgtttggtctgtt
tcaagacttgtggacgatgatctacagaacgagttacccctcccctacaccacgctttcc
gaccatacgctacccatcactgacattacctgtggtgtcggtgtcttccctcaactccgt
gttttgacagcatcggtggactacagtgtcaaggtttgggacctcgctacaaaatccctt
cttaccacttttaccttccctcaagtcatctcttgtctcgcttgggatgtggccgagcgt
ttctttttcgcagcggcgccggatggctccgttcaccaagtaaacttattccgggacgca
gacgaaaagttaggtattcccgccgaggcagtcggtggcgcgggacttagcgacgttata
cgcatcgaagatatcccagctgaggcgcggagaaagcggctcataattgtgagcgaaccg
gtctccgccctgtgtatcagcgcgaccggggcactcctcctagtcggtactacctcgggc
cccgtacacgtctacgacattccatcgcaccagcttctacggacgatcacgacgcacaag
ggcttcacggtcacgcacctggcgacgatgctgaagccgccggatctagtcggtcacgtc
agcctcagcatgagcgccggcgaccccaaggacgtcgtccccgtacggccggtcgcggcc
ttccagcgcatgcgcgacgcgaaagcgcgcaccgcgcacgaggtcgcgacgcttctgccg
ccgagagcaaggacggcggatattgcgtactctgaggacgagatgctgcgcgatcacgcc
ttctttttgcaacccgcgcagacgggcagcgggcagcaggacgccgtaacgctgcaggcg
cgcgtgacggacctggagggcgaggtggccgcgctgagggagcagctgggcaaagcgaag
ggcgtgaacgacatgatgtgggacaatatcgtgcagaaagtcgtgcgcaaccggcagacg
ggcgcccacgacgacggcgaagcggacgaggagcggaagaggaagcgcgggcggacatga
DBGET
integrated database retrieval system