Schizophyllum commune: SCHCO_01210304
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Entry
SCHCO_01210304 CDS
T01331
Symbol
SCHCODRAFT_01210304
Name
(RefSeq) uncharacterized protein
KO
K14290
exportin-1
Organism
scm
Schizophyllum commune
Pathway
scm03008
Ribosome biogenesis in eukaryotes
scm03013
Nucleocytoplasmic transport
scm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_01210304 (SCHCODRAFT_01210304)
03008 Ribosome biogenesis in eukaryotes
SCHCO_01210304 (SCHCODRAFT_01210304)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SCHCO_01210304 (SCHCODRAFT_01210304)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_01210304 (SCHCODRAFT_01210304)
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_01210304 (SCHCODRAFT_01210304)
03016 Transfer RNA biogenesis [BR:
scm03016
]
SCHCO_01210304 (SCHCODRAFT_01210304)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_01210304 (SCHCODRAFT_01210304)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SCHCO_01210304 (SCHCODRAFT_01210304)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SCHCO_01210304 (SCHCODRAFT_01210304)
Pre-60S particles
SCHCO_01210304 (SCHCODRAFT_01210304)
Transfer RNA biogenesis [BR:
scm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SCHCO_01210304 (SCHCODRAFT_01210304)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
SCHCO_01210304 (SCHCODRAFT_01210304)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
9597399
NCBI-ProteinID:
XP_003035969
UniProt:
D8PWM4
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MEALLDFSADFDVSLMDRVVVAFYTGAGAEQQMAQQVLTQFQDNPEAWTRVPDILERSSF
PQTKYIGLQILEKLISTRWKSLPDGQRQGIRNFVVGLTVQLGSDETVMRREKTYLNKLNL
ALIQILKQEWPHNWPNFISELVESSKTNLSLCENNMVILKLLSEEIFDFSADQMTTVKIK
NLKNQMCGEFSEIFKLCQEVLQDANKASLIKAALETFLRFLNWIPLGFIFETTIIDLLLN
RFLETPEFRNVTLKCLAEIAALNVGPEYDPKFAILFAMVMTSVNKMIPPGTDFASAYANA
SDAGQELILNLALFLANFLSNHLRVVENEENKDVLLNAHMYMVKISQVDEREVFKICLEY
WVKLVSELYEELQSLPIGESGMLMNLSLGNGPGESSLLAGMNLRKNIYAAVLSNLRLVVI
ERMVKPEEVLVVENDEGEIVREFMKESDTIVLYKSMRELLVYLTHLDVNDTETILTDKLA
KQVDGSEWSWNNLNTLCWAIGSISGAMNEETEKRFLVTVIKDLLGLCEIKRGKDNKAVVA
SDIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRRHFVM
QQSGEGEPFVDEILRMLHRITVDLSPQQVHTFYEAVGYMISAQPNKPQQERLIAKLMELP
NSAWDSLMAQAAQSMDVLSSTDNIKILANVLKTNVAACTSIGSFYLPQIGRIFLDMLGLY
KAVSHIISDTVAKEGPIATKTPKVRQLRTVKKEILKLMETYIRRAEDLDSVNSNFMPPLL
DAILGDYNSNVPTARDAEVLNVMATITNRLGPLLTPQVPAILDAVFEPTLNMINQDFSEY
PEHRVGFFKLLRNINLNCFPALLTIPPPQFKLFMDSVIWAIKHTMRDISDIGLLMCIEIV
NNFANAADPAVSNAFFQQFFLSIVQDTFFVLTDTDHKSGFKLQSQLLARMFQLVEQGAIV
QPLYDTAQFPDPALNNSIFFQEFTVNLLKTAFPHLNPLQVQDFVKTLATSHTDPLAFKTA
LRDFLIQLKEFAGDNQELYLEEKEAAARQKAEEERQQAMRIPGMLKPSQIEDKDEDI
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctactcgatttctcagccgatttcgatgtgtccctcatggaccgcgtcgtt
gtcgcgttctatacgggggcaggggcggagcaacaaatggcacagcaagtgctgactcaa
tttcaagacaaccccgaagcctggacgagggtaccggacatcctggagcgatcgtcattc
ccccaaacgaagtacatcggtcttcaaattttggagaaactcatcagcacgcgttggaag
tccctccccgatggtcaacggcaaggcattcggaactttgttgtcggcctcacggtgcag
ctaggatctgacgagacggttatgcggagggaaaagacgtacctcaacaaactcaacctt
gcgctcatccagatcctcaagcaggagtggccacacaactggcccaacttcatctccgag
cttgtcgagtcttccaagaccaacctctccctttgcgagaacaacatggttatactgaag
ctgctgtccgaggaaatcttcgacttctccgccgaccagatgacgacagtcaagatcaaa
aacctgaagaatcagatgtgcggcgagttctcggagatcttcaagctctgccaggaggtg
ctgcaggacgccaacaaggcctccctcatcaaggctgctctggagacattcctgcgcttc
ctcaactggatcccgctgggattcatctttgagacgaccatcattgaccttttgctcaac
cggttcctcgagacgcccgaattccgcaatgtcacgctcaagtgtcttgcggagatcgct
gcgctcaacgttggtcccgaatacgaccccaaattcgccatcctctttgccatggtcatg
acatctgtcaacaagatgatcccgccgggcacggacttcgccagcgcatatgccaacgca
tcggacgccggccaggagctcatcttgaaccttgcgctcttcctcgccaacttcctctcg
aaccatctgcgtgtcgttgagaatgaggagaacaaggatgtgctgctcaacgcgcatatg
tacatggtcaagatctcacaggtcgacgagcgcgaggtgttcaagatctgcttggagtac
tgggtcaaacttgtctcggagctgtacgaggagctgcagagtctacctatcggcgagagt
ggcatgctcatgaacctgagtctcggcaacggtcctggggaaagcagcttgctcgctggt
atgaacttgcggaagaacatctacgctgctgtactctcgaatctacgtctggtcgtcatc
gagcgcatggtcaagcccgaagaggttctcgttgtcgagaacgacgagggtgagatcgtt
cgtgagttcatgaaggagagcgacaccatcgtgctatacaagtctatgcgcgagttgctg
gtttaccttactcacttggacgtcaatgacacggagaccatcctcacggacaagctcgca
aagcaggtcgacggctcagaatggtcatggaacaacctcaacacgctatgctgggctatt
ggctcgatatcgggcgccatgaacgaggagactgaaaagcgcttcctcgtcactgtcatc
aaggacctcctcggcctgtgcgagatcaagcgcggcaaggacaacaaggccgtcgtcgcc
tcggatatcatgtacattgtcggccagtacccgcgcttcctcaaggcgcactggaagttc
ctcaagactgtcgtcaacaagctcttcgagtttatgcacgagacgcacgagggtgtccag
gacatggcgtgcgacacgttcatcaagattgcgcagaagtgccggagacactttgtgatg
cagcagagcggggagggcgaaccgtttgtagacgagatcttgcggatgctgcatcggatt
acggtcgacttgtcgccgcagcaggtccacacattctacgaggccgtcggctacatgatc
tctgcgcagcccaacaagccccagcaagagcgtttgatcgcaaagctcatggaattgccg
aacagcgcctgggactcgttgatggcgcaagcagcacaaagcatggacgtcttgtcaagt
acggataacatcaagatcctggcgaacgtcttgaagacgaacgtcgcggcgtgcacttcc
attggcagcttctacttgccacaaatcgggcggatattccttgacatgctcggcttgtac
aaggctgtcagccacatcatcagcgacacggtcgcgaaggagggccccatcgcgaccaag
acaccaaaagtcaggcaactgcggacggttaagaaggagatcctcaagctcatggagacc
tacatccgacgagccgaggacctcgactccgtcaacagcaacttcatgccgcccttactc
gacgccattctcggtgactacaactccaacgtcccgaccgcccgcgacgccgaggtgctg
aacgtgatggcgacgataacgaaccgtttgggtccgctgctcacgccacaagtgccggcg
atcctggacgcggtgttcgagccgacgctgaatatgatcaaccaagacttctcggagtac
cctgaacaccgcgtcgggttcttcaagctgttgaggaatattaatctgaactgcttccct
gccctcctcaccattccgccgccacagttcaagctgttcatggacagcgtcatctgggct
atcaagcacactatgcgcgacatctcagatattggcttgttgatgtgcatcgagatcgtc
aacaacttcgccaacgccgccgatcccgccgtcagcaacgccttcttccagcagttcttc
ctgagcatcgtccaggacacgttcttcgtgctaacagacacggatcacaagagcgggttc
aagctgcagagccagctgttggcgcgcatgttccagctcgtcgagcagggcgcgatcgtg
cagccgctgtacgacacggcgcagttcccggatccagcgctgaacaactcgatcttcttc
caagagttcacggtgaacctgctgaagacggcattcccgcacttgaaccccttgcaagtg
caggacttcgtcaagaccctcgctacgagccacaccgacccgctcgccttcaagaccgcg
ctgcgcgacttcctcattcagctcaaggagttcgccggcgacaaccaggagctctacctt
gaggagaaggaggccgccgcgcgacaaaaggccgaggaggagcgccagcaggcgatgcgc
atccctggtatgctcaagccgtcgcagatcgaggacaaggacgaagacatatga
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