Schizophyllum commune: SCHCO_01228862
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Entry
SCHCO_01228862 CDS
T01331
Symbol
SCHCODRAFT_01228862
Name
(RefSeq) uncharacterized protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
scm
Schizophyllum commune
Pathway
scm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SCHCO_01228862 (SCHCODRAFT_01228862)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scm03021
]
SCHCO_01228862 (SCHCODRAFT_01228862)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_01228862 (SCHCODRAFT_01228862)
Transcription machinery [BR:
scm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
SCHCO_01228862 (SCHCODRAFT_01228862)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
SCHCO_01228862 (SCHCODRAFT_01228862)
RSF complex
SCHCO_01228862 (SCHCODRAFT_01228862)
WICH complex
SCHCO_01228862 (SCHCODRAFT_01228862)
B-WICH complex
SCHCO_01228862 (SCHCODRAFT_01228862)
NORC complex
SCHCO_01228862 (SCHCODRAFT_01228862)
BRF complex
SCHCO_01228862 (SCHCODRAFT_01228862)
NuRF complex (fruit fly)
SCHCO_01228862 (SCHCODRAFT_01228862)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
DBINO
AAA_14
DEAD_2
COG4_m
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
9584787
NCBI-ProteinID:
XP_003038499
UniProt:
D8PNN4
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSSAGPAPMEEDMLSDAVPSNIVSRQPSNGASEEPEEAPEKDELESEGGQDDADYAAPNS
TPRRRGRKTDKQKAADSSLQKKREEMDKNKITDAVKRYSYLLGQTDLFKHFVDIRRAQDP
EYAAMMDAQPKPKGRGRKKTIDASTRHRKSEKEEDEELLKEGERAVDGSDQPYVFEESPS
FINGTMRAYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHHHGIKGPHLI
IVPKSTLRNWEREFEKWTPDFKAVVLTGSKEERAEIVASRLITEDFEVCITSYEICLIEK
SALKKFSFEYIVIDEAHRIKNVDSILSEVVRSFISRGRLLITGTPLQNNLQELFALLNFI
CPEIFRDYKDLDSFLHKDTGDGVDEEEKSKRVVEALHKILRPFLLRRVKSDVEKNLLPKK
EINIYVGLSDMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNMVMQLRKVTCHPYLFDGA
EPGPPYTTDEHLVENCGKMLILDKLLKSMKEKGSRVLIFSQMSRMLDILEDYCLFRGYKY
CRIDGGTAHDDRITAIDEYNKPDSDKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQAD
LQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKLRLDQLVIQQGRQQQSKAANKE
ELLDMITHGAEKIMNATDELLINDDIDEIIHRGEQRTHELNSKYEGLNLEDLSNFKSDAS
VQQWEGEDFRSKKNLNFNMISLAKRERKSNYSVDNYFKDTLRAGPAKVDKAPKLPKAPKQ
VTVQDFQFFPPELTQLQERELAVHKRLNDIKATTREPAGPEDTPEKLEEERQAAQEFIDT
AEPLTEEEIAQKDAYISKGFGDWTRRDFQQFVRGLETYGWGASFDLYASEIPDKTAGEVA
QYYKVFKERWTTLADHPRIAARIAEGEQKRNKRQNLEQLLEEKINSVNYPMQELELNYPT
TKGKVYSEEEDRYLLCRLYHYGMQTEDVYERIKKDITEFPVFRFDWFFKSRSAIELNRRC
NTLLGMIEKEAEQQAAEQKAQSSSSTRGKKRGIDEVKKQDSRAPTPTGSAAGSTAKRATK
KKKT
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgctggcccagcacccatggaggaagatatgctcagcgacgcggttcccagc
aacatcgtctcgcggcagcccagcaacggcgcgagcgaggagcccgaagaggccccggag
aaggatgagctggagagcgagggcggtcaagacgatgctgactatgctgcccccaattcc
acacctaggagacggggaaggaagacggataagcagaaggccgccgactcgagtttgcag
aagaagcgggaggagatggacaagaacaagatcaccgacgcagtgaagcgctattcctac
ctgctcgggcagacagatttgttcaagcacttcgtagacattaggcgcgctcaagatccc
gagtatgctgccatgatggacgcacaacccaagccgaagggtaggggacgcaagaagacg
atcgatgccagcacgcgccatcgcaagtctgaaaaggaagaagatgaggagctcctgaaa
gagggcgagcgcgccgttgatggcagcgaccaaccctacgtgttcgaagagtctccaagc
ttcatcaacggaactatgcgagcataccaattgcagggtctcaactggatggtgtcgctg
catcacaatgggttgaacggtatccttgcagacgagatgggtcttggaaagacgctgcag
accatctcgtttctcgcatacctcaagcaccaccatggcatcaagggacctcacctcatt
attgtccccaagtctactctgcgcaactgggagcgcgaattcgagaagtggacgcccgac
ttcaaggccgtcgtcctcactgggtccaaagaggaacgtgcggagattgtggcgagccgc
ctcatcaccgaggacttcgaagtctgcatcacgtcctacgaaatctgcctcatcgagaag
agcgctctcaagaagttctcgttcgagtacatcgtcatcgacgaggctcaccgcatcaag
aacgtcgactccatcctctccgaagtcgtccgctcgttcatctcgcgtggaaggctgctc
atcaccggcacgccgctgcaaaacaacttgcaggagctgttcgccttgttgaacttcatc
tgccctgaaatcttccgggactacaaggatttggacagcttcttgcacaaggacacaggc
gatggtgtggacgaagaggagaagagcaagcgggttgtagaggcattacacaagatcttg
cggcccttcctcctgcgtcgtgtcaagtccgacgtcgagaagaacttgttgccgaagaag
gagatcaacatctatgtcggcttgagtgacatgcagcggaaatggtatcgctcagtcctc
gagaaggacatcgacgctgtcaacggtcttaccggcaagaaggagggcaagacgcggctg
atgaacatggtcatgcagctgcgcaaagtgacttgccatccgtacttgtttgacggtgct
gagccgggcccaccatacacgaccgacgagcacctcgttgagaactgtggcaagatgctc
attctcgacaagctcctcaagtcgatgaaggagaagggctcccgcgtgctcatcttcagt
cagatgagccgtatgctcgacatcctcgaggattactgcctcttccgtggctacaagtac
tgtcgcatcgacggtggaacggcccacgacgaccgtatcaccgccattgacgagtacaat
aagcccgacagcgacaagtttatcttcctgctcaccacgcgtgccggtggtcttggtatc
aacttgactactgctgacattgtcgtcctgtacgacagcgattggaaccctcaggcggat
ctgcaggctatggaccgtgcgcatcgtatcggtcagaccaagcaggtctatgtcttccgc
ttcatcacggaaggcagtgttgaggaacgcatgttagagagggctgcacagaagttgcgg
cttgaccagctcgtcatccagcaaggaaggcaacagcagtcgaaagctgccaacaaggaa
gagttgctcgacatgatcactcacggcgctgagaagattatgaacgccactgacgagctg
ctcatcaacgacgacatcgacgagatcatccatcgcggcgagcagcgcacacacgagctg
aacagcaagtacgaaggcctcaacctcgaggacctgagcaacttcaagtccgatgcgtcc
gtgcagcagtgggagggcgaggacttccggagcaagaagaacttaaacttcaacatgatc
tctctggcgaagcgcgagcgcaagtcgaactactccgtcgacaattacttcaaggatacg
ctgcgcgcaggccctgcgaaggtggataaggcgccgaagttgcccaaagcaccgaagcag
gttactgttcaggacttccagttcttccctccggagcttacgcagctgcaagagcgcgag
cttgcggtgcacaagcgcctaaacgacatcaaggcgacgacgcgggagcctgcaggcccg
gaggatacgccagagaaactcgaggaagagcgacaagctgcgcaggagttcatcgacacg
gccgagcctctgaccgaggaagagatcgcgcagaaggacgcatatatcagcaagggcttc
ggcgattggacccgccgcgacttccagcagttcgtgcgtgggctggagacctacggatgg
ggtgcgagcttcgacctctatgcctcagaaatccccgacaagactgcgggcgaggtggcc
cagtactacaaggtcttcaaggagaggtggacgactctggcagaccaccccaggatagcc
gcccgcatcgccgagggcgagcagaagcgcaacaagcgccaaaacctcgagcagctcctc
gaggaaaagatcaactccgtcaactaccccatgcaggagcttgagctgaactacccgacc
acgaagggcaaggtctacagcgaggaggaagaccggtacctgctctgccggctctaccac
tacgggatgcagacggaggatgtgtacgagcgcatcaagaaggatattacggagttccct
gtgttccgcttcgactggttcttcaagagccggtccgcgattgagctgaacaggcggtgt
aacacgctgctgggcatgattgagaaggaggcggagcagcaggcggcggagcagaaggcg
cagagcagtagtagtacgaggggaaagaaacggggcatcgacgaggtcaagaagcaggac
tcgcgcgcgccgacgccgacaggctccgccgcaggttcgacagccaagcgggcgacgaag
aaaaagaagacatga
DBGET
integrated database retrieval system
