KEGG   Schizophyllum commune: SCHCO_01356221
Entry
SCHCO_01356221    CDS       T01331                                 
Symbol
SCHCODRAFT_01356221
Name
(RefSeq) Sm-like ribonucleoprotein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
scm  Schizophyllum commune
Pathway
scm03018  RNA degradation
scm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SCHCO_01356221 (SCHCODRAFT_01356221)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCHCO_01356221 (SCHCODRAFT_01356221)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_01356221 (SCHCODRAFT_01356221)
   03041 Spliceosome [BR:scm03041]
    SCHCO_01356221 (SCHCODRAFT_01356221)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SCHCO_01356221 (SCHCODRAFT_01356221)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SCHCO_01356221 (SCHCODRAFT_01356221)
Spliceosome [BR:scm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SCHCO_01356221 (SCHCODRAFT_01356221)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9588317
NCBI-ProteinID: XP_003030122
UniProt: D8Q9E1
LinkDB
Position
Unknown
AA seq 95 aa
MSSLQGYVDRRVLLVLQDGRTIVGVLAGFDQKSNIILSECRERVYSMDEGVEEIPLGLYI
VKGDMICLIGEIDNDRDAAIDISTIRAEPIPPIRY
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtcgtccctgcaaggctacgtcgatcgtcgcgtactgcttgtgttgcaggatggacga
acgatcgtgggtgttctagctggctttgaccaaaaatcgaacatcatcctgtccgagtgc
cgtgagcgcgtctactccatggatgagggcgtggaggagatcccactcgggctatacatc
gtgaagggggacatgatatgcttgatcggagaaatagacaatgaccgcgacgcagcaatt
gacatatccactattcgcgccgagccaatcccaccaattcgatactag

DBGET integrated database retrieval system