Schizophyllum commune: SCHCO_02022630
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Entry
SCHCO_02022630 CDS
T01331
Symbol
SCHCODRAFT_02022630
Name
(RefSeq) tRNA-intron endonuclease catalytic domain-like protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scm03016
]
SCHCO_02022630 (SCHCODRAFT_02022630)
Enzymes [BR:
scm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SCHCO_02022630 (SCHCODRAFT_02022630)
Transfer RNA biogenesis [BR:
scm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
SCHCO_02022630 (SCHCODRAFT_02022630)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Lys-AminoMut_A
AIM3
Motif
Other DBs
NCBI-GeneID:
9595749
NCBI-ProteinID:
XP_003035976
UniProt:
D8PWP2
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MAPVRISISNRRAFIWDVDDIATVRSRHRICGLLTGTLPRLAQQNAFLGVPLVLMSQEVT
LLVEKGFAVLVDDALAHRSPSPEEAARWADAQTADIESQLAAAEELSRNRQTNVADKSMS
EEAIRKRKEREAKRAAKAQQSEDAAVFVPPPEEAPAPSAQPSQASIFTISLPASSSGLLW
YEPENKTYTTLEAAREADLWTYPETLQDRAQYGVFRDLWEQSYFMGIGIRFGADYLVYPG
DPLRYHSHFAATVIESPDAPMRPMEIVAHGRLGTATKKAHLLCSWDDDKRTVSYLSIEWA
GFG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgtccgaatcagtatctcgaaccggcgggcgtttatttgggatgtcgacgat
atagcgaccgtacgctcacgccaccgtatatgcggtctactcaccggcacccttccccgt
cttgcccaacaaaatgcattcctcggtgtccccctcgtcctcatgtcccaagaagtgact
ttactcgttgagaagggcttcgccgtactcgtcgacgacgccctcgcacaccgatccccc
tcccccgaagaggcagcacgctgggcagacgcgcaaactgcagacatcgaatctcagctc
gcagccgccgaagagctctcgcgcaaccgtcagactaacgtcgcagacaaatccatgtcc
gaagaggccattcgcaaacgcaaggaacgcgaggcgaagcgcgcagcgaaggcacagcag
tccgaggatgccgcggtcttcgtccctccaccagaagaggcgccggcgccatcggcacaa
ccctcacaggcgtctatattcacaatttctctgccggcctcgtcgtcggggctgctctgg
tatgagccggagaacaagacatacacgacgcttgaggccgcacgagaagcggatttgtgg
acgtacccagagacattgcaagaccgtgcgcagtacggcgtcttccgcgatttatgggaa
cagagctatttcatgggcattggtatccgcttcggtgcggattacctcgtctatccaggc
gaccctctccgatatcactcgcatttcgctgcgaccgtcattgagtcgccggacgcgcca
atgcgtccgatggagattgtggcacatggacgactgggtacggcgacgaagaaggcgcat
cttctatgcagctgggacgacgacaagcggacagtctcgtatttgtctatcgagtgggct
ggcttcggttag
DBGET
integrated database retrieval system
