Schizophyllum commune: SCHCO_02043077
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Entry
SCHCO_02043077 CDS
T01331
Symbol
SCHCODRAFT_02043077
Name
(RefSeq) DEAD-domain-containing protein
KO
K03257
translation initiation factor 4A
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02043077 (SCHCODRAFT_02043077)
03012 Translation factors [BR:
scm03012
]
SCHCO_02043077 (SCHCODRAFT_02043077)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scm04147
]
SCHCO_02043077 (SCHCODRAFT_02043077)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SCHCO_02043077 (SCHCODRAFT_02043077)
mRNA cycle factors
Stress granule specific factors
SCHCO_02043077 (SCHCODRAFT_02043077)
Translation factors [BR:
scm03012
]
Eukaryotic type
Initiation factors
eIF-4
SCHCO_02043077 (SCHCODRAFT_02043077)
Exosome [BR:
scm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCHCO_02043077 (SCHCODRAFT_02043077)
Exosomal proteins of bladder cancer cells
SCHCO_02043077 (SCHCODRAFT_02043077)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
9587088
NCBI-ProteinID:
XP_003035589
UniProt:
D8PU22
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSAEDTLQDVAEGEIESNWDQVVDNFDNMNLKPELLRGIYAYGFERPSAIQQRAIVPVVK
GHDVIAQAQSGTGKTATFSISILQQLDMSIKGTQALILAPTRELAQQIQKVVIALGDYMN
IECHACVGGTVVREDIAKLQEGVHVVVGTPGRVHDMINRRALRTDNIKIFCLDEADEMLS
RGFKDQIYEVFQLLPQDIQVVLLSATMPAEVLEVTKKFMREPVRILVKRDELTLEGIKQF
YIAVEREEWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTEKMHAREFTVSAMHGDMEQK
QREVLMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRK
GVAINFVTTDDVRMLRDIEQFYNTQIDEMPLNVADLI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaagatactctccaggatgtcgccgagggcgagattgagtccaactgggac
caggtcgtcgacaacttcgacaacatgaacctgaagccggagcttctccgtggtatctac
gcctacggttttgagcgtccgtctgcgattcagcagcgcgctatcgtccccgtcgtgaag
ggccacgacgttattgcgcaggcgcagtcgggtaccggcaagaccgctaccttctcgatc
tccatcctgcagcagctcgatatgtcgatcaagggcacccaggcgcttatcctcgcaccc
acgcgtgagctcgcgcagcagatccaaaaggtcgtcatcgcgcttggcgactacatgaac
atcgagtgccacgcgtgtgtcggtggtaccgtcgtccgcgaggacattgcaaagctccag
gagggtgttcacgtcgttgtcggcaccccgggtcgtgtccacgacatgatcaaccgtcgc
gccctccgcaccgacaacatcaagatcttctgtctcgatgaggccgatgagatgttgtcg
cgtggtttcaaggaccagatctacgaggtcttccagcttcttcctcaggacatccaggtc
gtcctcctgtccgccacgatgccggccgaggtcttggaggtcacgaagaagttcatgcgc
gagcccgttcgcatcctcgtcaagcgcgacgagcttacgcttgagggtatcaagcagttc
tacatcgccgtcgagcgcgaggagtggaagctcgacacgctctgcgatttgtacgagacc
gtcaccatcacgcaggccgtcatcttctgcaacacccgccgaaaggtcgactggctgacg
gagaagatgcacgcgcgcgaattcaccgtgtccgccatgcacggcgacatggagcagaag
cagcgtgaggtcctcatgaaggagttccgttcaggctcttctcgtgtcctgatcaccacc
gacttgctcgcccgcggtatcgatgttcagcaagtatccctcgtcatcaactacgacttg
ccgacgaaccgggagaactacatccaccgtatcggccgtggcggtcgtttcggtcgcaag
ggtgtcgcaatcaacttcgtgaccaccgacgacgtgcgcatgctccgcgacatcgagcaa
ttctacaacacccagatcgacgaaatgcctctcaacgttgccgacctcatttaa
DBGET
integrated database retrieval system
