KEGG   Schizophyllum commune: SCHCO_02301738
Entry
SCHCO_02301738    CDS       T01331                                 
Symbol
SCHCODRAFT_02301738
Name
(RefSeq) WD40 repeat-like protein
  KO
K14962  COMPASS component SWD2
Organism
scm  Schizophyllum commune
Pathway
scm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SCHCO_02301738 (SCHCODRAFT_02301738)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02301738 (SCHCODRAFT_02301738)
   03036 Chromosome and associated proteins [BR:scm03036]
    SCHCO_02301738 (SCHCODRAFT_02301738)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SCHCO_02301738 (SCHCODRAFT_02301738)
Chromosome and associated proteins [BR:scm03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     SCHCO_02301738 (SCHCODRAFT_02301738)
    COMPASS/SET1 complex (yeast)
     SCHCO_02301738 (SCHCODRAFT_02301738)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_DCAF12 DSE1_N Beta-prop_WDR36-Utp21_1st PAC11 CFAP251_N Beta-prop_SCAP
Other DBs
NCBI-GeneID: 9589400
NCBI-ProteinID: XP_050200204
LinkDB
Position
Unknown
AA seq 380 aa
MKLKPARIFKGAVEPTPAPSPGAPQRGPAGPKHITGLSFDDQGNQLITAGEDETFKLYSC
KTGKQLKVFYSKKYGVTLPRFTHKSTAIVHASTKEDDTIRYHSLHDNKYLQYFRGHKGTV
TSLEVSPVDDGFISGSMDKTVRMWDLRAPTCRGLLPLPSPPVCAYDPSGMVIAVVINRHA
RVLMFDLANYDKDPFLVVELVDPTLSRISYPPRPICATSLSFSANGKFMLIGCSGDAHYI
ADAYYGNIIAKLEGHVGLERRSTNAQVTIEPVRGCSGEEVSWTPDSKYVVSGSLDGKIIM
WHMEPLSNMMEKKNEDERKTMAMIQIPPLVKLDGHPGPSRCVKFNPRLLMMASAGQELAF
WLPDPAPDSEETAKDILKKM
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgaagttgaagcctgcgcgaatattcaaaggcgccgttgaaccaacccccgcaccatct
cccggcgcgccacagaggggccctgcgggtcctaagcacatcactgggctctcttttgat
gaccaggggaaccagctgattacggcgggcgaggacgagacgttcaagctctacagttgc
aaaactggcaaacagctgaaggtcttttactcgaagaaatacggtgttacactaccccgc
ttcacgcacaagagcaccgcgatcgtgcatgcgtcaacgaaagaagacgacaccatccgg
taccactcactgcacgacaacaagtatctgcagtactttcgcgggcacaaaggaacggtg
acctcccttgaggtctcaccagtcgacgacggcttcatctctggctccatggacaagacg
gtccgcatgtgggaccttcgcgcaccgacatgtcgtggcctgctcccccttccctcccct
ccagtatgcgcctatgacccctctggcatggtcatcgccgtcgtcatcaaccggcacgcg
cgcgtcctcatgttcgacctggcgaactacgacaaggacccctttctcgtcgtcgagctc
gtcgaccccacgctctcacgcatcagctatccgccacggccgatctgcgccacttcactt
tcgttctctgcgaacggcaagttcatgctcatcggttgctccggtgacgcgcactacatc
gcggacgcctactacgggaacatcatcgccaagctcgaggggcacgtcgggctcgagcga
cgctcgaccaacgcacaggtgacgatcgaaccagtgcgcggatgcagtggggaagaggtg
tcgtggacgccggacagcaagtatgttgtgtcgggcagcctagacggcaagatcatcatg
tggcacatggagccgttgagcaacatgatggagaagaagaacgaggacgagcgaaagacg
atggctatgatccagataccgccactcgtcaaacttgacggtcatccggggccttcccga
tgtgtcaagttcaatcctcggctactcatgatggcttcggccggccaggagctggcgttc
tggctaccagatcccgcaccggacagtgaggaaactgccaaagacatcttgaagaagatg
tga

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