KEGG   Schizophyllum commune: SCHCO_02483436
Entry
SCHCO_02483436    CDS       T01331                                 
Symbol
SCHCODRAFT_02483436
Name
(RefSeq) Utp21-domain-containing protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
scm  Schizophyllum commune
Pathway
scm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SCHCO_02483436 (SCHCODRAFT_02483436)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scm03009]
    SCHCO_02483436 (SCHCODRAFT_02483436)
Ribosome biogenesis [BR:scm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SCHCO_02483436 (SCHCODRAFT_02483436)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 PQQ_2 DUF334 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 9594463
NCBI-ProteinID: XP_003035287
UniProt: D8PSR4
LinkDB
Position
Unknown
AA seq 979 aa
MAKTTTTTLQPASVSSEPPRPRKRARRDASPSAPSPTSTSTHSPTPRLFSPFRALGIITN
HVPFALQARSHKGAVDGPRVHLLTSVGRSYALWEANKMTLLFVGTPAPQPIAALAMDGDA
VWAAAGAHLIKYLRGKEVLRAGNPHARPLATATIFGNQILALEEGGGRLLLFSTADGELV
RDIAFAAGFTATRLLHPATYLNKVLVASAEGGMELWNIRDGARIYAFDARGLSPGSGASA
VTALVQAPAVDVVGIGFADGGIAVHDVRADERLLSFDMGLGSNMGLSSSVDGSTSSSSSP
IRALAFRTDGAPILASADASGALAIWDLNAPAKLLHLVHGAHDAGVTALEWVPGQPLLIS
AGEDNSVKQWLFDLPTAAPRLLKSRTGHRAPPTLVRFYGADGKQVLTAGPDRALRLTSLV
RESRGCEMSQGRGTMGPNPPTPKPKLAPITALASSTAHAKDWDDVVTAHAGDRFARTWST
QNKRLGKYALEGEGVVKATALTACGTFALAGGAGGVVRMWNAQSGVLRRVFKVGDLGTKG
ETSTAASATRYRKQSDRTITGIATDALNTVLVASTLDGTINFFDFHTVDLLHTLTIAPLS
ASATSGASHPSAGLLAVPCDDLAVRVVDLETRAVVRVLRGFGGRIMDVTFSPDARWLVAA
SLDAAIRTFDVPSGRLIDVFRCLQSGTPSTPTSVAFSPAGDFLATTHVDSVGVFLWVNRA
QFTDVSLHGVADSAGAAVVLPGMQGDAEEEALDALSALTVQDPIAELPPTATPPQLSGDL
VTLTLLPRARWMTLLNLDVIQLRNKPKEPPKAPEKAPFFLPTVPGVNPTFDLTAAAANTS
TGEDSEAAKKSRRLDSLENGFVRALTEEGPDGSYDALFTLIKTLSPPALDAELRSMTAPA
HQARLLRALTQRLRARRDFEAVQAVMGVVLKIWGESLVGSATPADALAELREVQAKESER
VLGLVAASLGTLGFIRETL
NT seq 2940 nt   +upstreamnt  +downstreamnt
atggcgaaaacgacgaccacgacgctgcagccagcatccgtctcctccgagccccctcgc
cctcgaaaacgcgcccgccgcgacgcctccccatccgccccttcccctacctctacctcc
acccactcccccaccccccgcctcttttctcccttccgcgcccttggcatcatcaccaac
cacgtccccttcgccctccaggcccgctcccacaagggcgccgtcgacggcccccgcgtg
cacctcctcacctccgtcggccgctcctacgccctgtgggaggccaacaagatgacgctg
ctgttcgtcggcacgcccgcgccccagccgatcgccgccctcgcgatggacggggacgcg
gtctgggcggccgcgggcgcacacctcataaagtacctccgcggcaaggaggtgctgagg
gcggggaatccgcacgcccggcccctcgccaccgcgaccatattcggcaatcagattctt
gccctcgaggagggaggcgggcgcctgctgctgttcagcacggcggacggcgagctggtg
cgcgacatcgcgttcgcggccggcttcaccgcgacccggctcctccaccccgcgacctac
ctcaacaaggtgctcgtcgcgtctgcggagggcggcatggaattgtggaacatcagggac
ggcgcgcggatatatgcgtttgatgcgcgggggctgagcccgggatcgggggcgagtgcg
gtgacggcgctggtgcaggcgcccgcggtggatgtcgtcggcatcggctttgcggacggg
ggcatcgcggtgcacgatgtgcgcgcggatgagcggctgctgtccttcgacatggggctg
ggctccaatatgggattgagctccagcgtggacggcagcacctcttctagctcttccccc
atccgcgccctcgccttccgcaccgacggcgcgcccatcctcgcgtccgccgacgcctcg
ggtgcactggcgatctgggacctcaatgccccggccaaactcctccacctcgtccacggc
gcgcacgacgcgggggtcactgcactcgagtgggtgcccgggcagccgctgctgattagc
gcgggggaggataattcggtgaagcaatggctcttcgacttacccaccgccgccccgcgg
ctcctcaaatcgcgcacgggccaccgcgcgccgcccacgctcgtccgcttctacggcgcg
gacgggaagcaggtgctcaccgcgggcccggatcgggcgctccggctgacgagcttggtg
agggagagccgggggtgcgagatgtcgcaggggcgggggacgatggggcccaacccgccc
acccccaaacccaagctcgccccgatcaccgccctcgcctccagcaccgcgcacgcgaag
gactgggacgacgtcgtcacggcgcacgcgggcgaccgcttcgcgcgcacgtggagcacg
cagaacaagcggctgggcaagtacgcgctggagggggagggggtggttaaggccaccgcc
ctcaccgcttgcggcaccttcgcactggccggcggcgcgggcggcgtcgtccgtatgtgg
aacgcgcagtccggcgtgctgaggagggtgttcaaggtgggagacctcggcacgaaggga
gagactagtacagcagcaagcgctacacgctatcgcaaacaatccgaccgcacgatcacc
ggcatcgcgacggacgccctgaacacggtgctggtagcgagcacgctggatgggacgatc
aatttcttcgacttccacaccgtggacctcctgcacacgctcaccatcgcgccgctgtct
gcgtctgctacctctggcgcctctcacccctccgccgggctgctcgccgtaccctgcgac
gacctcgccgtgcgcgtcgtggacctcgagacgcgcgcggtcgtgcgtgtgctgaggggc
tttggggggaggatcatggatgtgaccttctcccccgacgcccgctggcttgtcgcggcc
tccctcgacgcggcgatacgcactttcgacgtaccctcgggccgcctgatcgacgtcttc
cgatgtctccaaagcggcaccccaagcacgccgacgagcgtcgccttctcccccgcgggc
gactttctggcgacgacgcatgtggatagtgtgggcgtgtttttgtgggtcaaccgcgcg
cagttcaccgacgtctccttgcacggcgtcgccgacagcgccggcgcggcagtcgtcctg
cctggcatgcaaggcgatgcggaagaggaggccctcgacgctttatctgctttgactgtt
caggaccccatcgccgagctgccacccacggcgacgcctccacaactctcgggcgatctt
gtcacgctgacactccttccgcgcgcgcggtggatgacgctgttgaacctggatgtgatc
cagctgcgcaacaagcccaaagagccgcccaaggcgcccgaaaaggctcccttcttcctg
cctactgtgccgggcgtgaaccccacgttcgatttgaccgctgcggcggccaacaccagc
accggcgaagacagcgaagccgcgaagaaatcgcgccgcctcgactcgctggagaacggc
ttcgtgcgagccttgacagaagaggggccggatgggagctacgacgccctcttcaccctc
atcaagaccctctccccacccgccctcgacgccgagctgcgctccatgaccgcgcccgcc
caccaggcccgcctcctccgcgcgctcacccagaggctgcgcgcgcgccgcgacttcgag
gccgtgcaggcggtgatgggtgtcgtgttgaagatctggggcgagagtctggtgggctcg
gcgacgccggcggacgcgctggcagagctgagggaggtgcaggcgaaggagagcgagcgg
gtgctgggattagtggcggcgtcgttggggacgttgggcttcattagggagacgttatga

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