Schizophyllum commune: SCHCO_02483436
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Entry
SCHCO_02483436 CDS
T01331
Symbol
SCHCODRAFT_02483436
Name
(RefSeq) Utp21-domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
scm
Schizophyllum commune
Pathway
scm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCHCO_02483436 (SCHCODRAFT_02483436)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02483436 (SCHCODRAFT_02483436)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SCHCO_02483436 (SCHCODRAFT_02483436)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
PQQ_2
DUF334
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
9594463
NCBI-ProteinID:
XP_003035287
UniProt:
D8PSR4
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MAKTTTTTLQPASVSSEPPRPRKRARRDASPSAPSPTSTSTHSPTPRLFSPFRALGIITN
HVPFALQARSHKGAVDGPRVHLLTSVGRSYALWEANKMTLLFVGTPAPQPIAALAMDGDA
VWAAAGAHLIKYLRGKEVLRAGNPHARPLATATIFGNQILALEEGGGRLLLFSTADGELV
RDIAFAAGFTATRLLHPATYLNKVLVASAEGGMELWNIRDGARIYAFDARGLSPGSGASA
VTALVQAPAVDVVGIGFADGGIAVHDVRADERLLSFDMGLGSNMGLSSSVDGSTSSSSSP
IRALAFRTDGAPILASADASGALAIWDLNAPAKLLHLVHGAHDAGVTALEWVPGQPLLIS
AGEDNSVKQWLFDLPTAAPRLLKSRTGHRAPPTLVRFYGADGKQVLTAGPDRALRLTSLV
RESRGCEMSQGRGTMGPNPPTPKPKLAPITALASSTAHAKDWDDVVTAHAGDRFARTWST
QNKRLGKYALEGEGVVKATALTACGTFALAGGAGGVVRMWNAQSGVLRRVFKVGDLGTKG
ETSTAASATRYRKQSDRTITGIATDALNTVLVASTLDGTINFFDFHTVDLLHTLTIAPLS
ASATSGASHPSAGLLAVPCDDLAVRVVDLETRAVVRVLRGFGGRIMDVTFSPDARWLVAA
SLDAAIRTFDVPSGRLIDVFRCLQSGTPSTPTSVAFSPAGDFLATTHVDSVGVFLWVNRA
QFTDVSLHGVADSAGAAVVLPGMQGDAEEEALDALSALTVQDPIAELPPTATPPQLSGDL
VTLTLLPRARWMTLLNLDVIQLRNKPKEPPKAPEKAPFFLPTVPGVNPTFDLTAAAANTS
TGEDSEAAKKSRRLDSLENGFVRALTEEGPDGSYDALFTLIKTLSPPALDAELRSMTAPA
HQARLLRALTQRLRARRDFEAVQAVMGVVLKIWGESLVGSATPADALAELREVQAKESER
VLGLVAASLGTLGFIRETL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacgacgaccacgacgctgcagccagcatccgtctcctccgagccccctcgc
cctcgaaaacgcgcccgccgcgacgcctccccatccgccccttcccctacctctacctcc
acccactcccccaccccccgcctcttttctcccttccgcgcccttggcatcatcaccaac
cacgtccccttcgccctccaggcccgctcccacaagggcgccgtcgacggcccccgcgtg
cacctcctcacctccgtcggccgctcctacgccctgtgggaggccaacaagatgacgctg
ctgttcgtcggcacgcccgcgccccagccgatcgccgccctcgcgatggacggggacgcg
gtctgggcggccgcgggcgcacacctcataaagtacctccgcggcaaggaggtgctgagg
gcggggaatccgcacgcccggcccctcgccaccgcgaccatattcggcaatcagattctt
gccctcgaggagggaggcgggcgcctgctgctgttcagcacggcggacggcgagctggtg
cgcgacatcgcgttcgcggccggcttcaccgcgacccggctcctccaccccgcgacctac
ctcaacaaggtgctcgtcgcgtctgcggagggcggcatggaattgtggaacatcagggac
ggcgcgcggatatatgcgtttgatgcgcgggggctgagcccgggatcgggggcgagtgcg
gtgacggcgctggtgcaggcgcccgcggtggatgtcgtcggcatcggctttgcggacggg
ggcatcgcggtgcacgatgtgcgcgcggatgagcggctgctgtccttcgacatggggctg
ggctccaatatgggattgagctccagcgtggacggcagcacctcttctagctcttccccc
atccgcgccctcgccttccgcaccgacggcgcgcccatcctcgcgtccgccgacgcctcg
ggtgcactggcgatctgggacctcaatgccccggccaaactcctccacctcgtccacggc
gcgcacgacgcgggggtcactgcactcgagtgggtgcccgggcagccgctgctgattagc
gcgggggaggataattcggtgaagcaatggctcttcgacttacccaccgccgccccgcgg
ctcctcaaatcgcgcacgggccaccgcgcgccgcccacgctcgtccgcttctacggcgcg
gacgggaagcaggtgctcaccgcgggcccggatcgggcgctccggctgacgagcttggtg
agggagagccgggggtgcgagatgtcgcaggggcgggggacgatggggcccaacccgccc
acccccaaacccaagctcgccccgatcaccgccctcgcctccagcaccgcgcacgcgaag
gactgggacgacgtcgtcacggcgcacgcgggcgaccgcttcgcgcgcacgtggagcacg
cagaacaagcggctgggcaagtacgcgctggagggggagggggtggttaaggccaccgcc
ctcaccgcttgcggcaccttcgcactggccggcggcgcgggcggcgtcgtccgtatgtgg
aacgcgcagtccggcgtgctgaggagggtgttcaaggtgggagacctcggcacgaaggga
gagactagtacagcagcaagcgctacacgctatcgcaaacaatccgaccgcacgatcacc
ggcatcgcgacggacgccctgaacacggtgctggtagcgagcacgctggatgggacgatc
aatttcttcgacttccacaccgtggacctcctgcacacgctcaccatcgcgccgctgtct
gcgtctgctacctctggcgcctctcacccctccgccgggctgctcgccgtaccctgcgac
gacctcgccgtgcgcgtcgtggacctcgagacgcgcgcggtcgtgcgtgtgctgaggggc
tttggggggaggatcatggatgtgaccttctcccccgacgcccgctggcttgtcgcggcc
tccctcgacgcggcgatacgcactttcgacgtaccctcgggccgcctgatcgacgtcttc
cgatgtctccaaagcggcaccccaagcacgccgacgagcgtcgccttctcccccgcgggc
gactttctggcgacgacgcatgtggatagtgtgggcgtgtttttgtgggtcaaccgcgcg
cagttcaccgacgtctccttgcacggcgtcgccgacagcgccggcgcggcagtcgtcctg
cctggcatgcaaggcgatgcggaagaggaggccctcgacgctttatctgctttgactgtt
caggaccccatcgccgagctgccacccacggcgacgcctccacaactctcgggcgatctt
gtcacgctgacactccttccgcgcgcgcggtggatgacgctgttgaacctggatgtgatc
cagctgcgcaacaagcccaaagagccgcccaaggcgcccgaaaaggctcccttcttcctg
cctactgtgccgggcgtgaaccccacgttcgatttgaccgctgcggcggccaacaccagc
accggcgaagacagcgaagccgcgaagaaatcgcgccgcctcgactcgctggagaacggc
ttcgtgcgagccttgacagaagaggggccggatgggagctacgacgccctcttcaccctc
atcaagaccctctccccacccgccctcgacgccgagctgcgctccatgaccgcgcccgcc
caccaggcccgcctcctccgcgcgctcacccagaggctgcgcgcgcgccgcgacttcgag
gccgtgcaggcggtgatgggtgtcgtgttgaagatctggggcgagagtctggtgggctcg
gcgacgccggcggacgcgctggcagagctgagggaggtgcaggcgaaggagagcgagcgg
gtgctgggattagtggcggcgtcgttggggacgttgggcttcattagggagacgttatga
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