KEGG   Schizophyllum commune: SCHCO_02487874
Entry
SCHCO_02487874    CDS       T01331                                 
Symbol
SCHCODRAFT_02487874
Name
(RefSeq) Cullin-domain-containing protein
  KO
K10609  cullin 4
Organism
scm  Schizophyllum commune
Pathway
scm03420  Nucleotide excision repair
scm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SCHCO_02487874 (SCHCODRAFT_02487874)
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCHCO_02487874 (SCHCODRAFT_02487874)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scm04121]
    SCHCO_02487874 (SCHCODRAFT_02487874)
   03400 DNA repair and recombination proteins [BR:scm03400]
    SCHCO_02487874 (SCHCODRAFT_02487874)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scm04147]
    SCHCO_02487874 (SCHCODRAFT_02487874)
Ubiquitin system [BR:scm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     SCHCO_02487874 (SCHCODRAFT_02487874)
DNA repair and recombination proteins [BR:scm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      SCHCO_02487874 (SCHCODRAFT_02487874)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      SCHCO_02487874 (SCHCODRAFT_02487874)
Exosome [BR:scm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   SCHCO_02487874 (SCHCODRAFT_02487874)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 9584907
NCBI-ProteinID: XP_050202312
LinkDB
Position
Unknown
AA seq 665 aa
MPLRRPGLRARRGSRLVQSLLTYLNQSYARTHGKESTQDFGLRYFRQYLMLDSSIQRALS
ASIKRWIAEERGTKDNVPHAQRPVFVALFKHLQAHGLYPDYEEEYCALTREYYTAESERL
AKELDARAFLEHVLHRIEVEVDRARAVLSVGSWAIVRRATEESLCKGRLQWIAAYALGVL
VDRDEKDKLKEVYELFSRVDGLPKLNEVWKDYVKDKVTAIVTDVANDDKMVDRLLQFKNH
ANRIVEECFLTPYPEDKLVPEANPEDEHEASDKEDEASSSVIPARAPNQSFVYALTDAFG
KGFQARKIKPAEMIARYLDSTLRKGQKGKSDKEFEAGLDAALSLYKYTDDKDVFRTFYHR
ALAKRLLLQKSASDDFEIAMLKKLKEHYDPEFGMGEEMFKDLALSRDMMLDFHDKLPAND
LARRLTVMVLQRSAWPFTVSKSTIDLPPKMQDALSEFTKYYKGKHQGRVLDWDHALGTAT
LTARFDAGEKELSVSLYQAVVLLMFVDVPKRTFAEVKELAGKLDDGDLRRTLQSLACGKK
RVLLKVPPGKDVHNGDVFQFNAEFTDSQRRVHINSIQAKVSAEESQKTQYTIEGERKHIL
DAAIVRIMKGKKELTLQELQSSVIAAVAKHFIPDVKKVKGRIEAMVEQEYIERVPEKQNT
FRYVA
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgccgctacgtcgtccaggtctgcgggctcggcgaggatctaggctcgttcagtcgttg
ctcacttacctgaatcaatcgtatgccagaacacatggcaaagagtccactcaggatttc
ggcctccgatacttcaggcagtatcttatgcttgattcgtccatacagcgcgctctctct
gcctcgataaagcgctggatagccgaagagaggggcaccaaggacaatgtcccccatgct
caacgtcctgtatttgttgcgctcttcaagcatctccaagcgcacggactataccctgac
tatgaagaggagtactgcgcactcactcgcgaatactacactgcggagtcggagcggctc
gctaaggaactagacgcgcgtgctttccttgagcatgtcttgcaccgtattgaggtcgag
gtggaccgtgctcgagccgtgttgtctgttggaagttgggccattgttagaagagccact
gaggaatcactctgcaagggtcgactgcaatggattgccgcgtatgctttgggagtgctg
gtggaccgcgacgagaaggacaagctcaaagaggtttacgagctgttttcgcgggtcgac
ggattgccgaagcttaatgaagtttggaaagactacgtcaaggacaaggtcaccgccatc
gttactgacgtagcaaacgacgacaagatggtcgaccgcctcctgcaattcaagaaccac
gcgaatcgcatcgtagaggaatgcttcctcacgccgtatcccgaagacaagctcgtgcca
gaagcgaatccagaagacgaacacgaggcatctgacaaggaggacgaggcctcatcatct
gttataccggctcgcgcaccgaaccagagcttcgtatacgctctgacggatgcttttggc
aaaggcttccaagccagaaagatcaagccggccgagatgatagcacggtatctggactct
acactacggaagggtcagaaggggaaaagtgacaaggaattcgaagccggccttgacgct
gctttgagcctatacaagtatacggatgacaaggatgttttccgtaccttctatcaccgc
gcattggcgaagcgcttgctgctgcagaagagcgccagcgatgacttcgaaatcgccatg
ctgaagaagctgaaggagcactatgatcccgagttcggcatgggcgaggaaatgttcaag
gaccttgccttgtcgcgcgacatgatgctcgactttcacgacaagttgcccgcgaacgat
ctcgctcgccgtcttaccgtgatggtgttgcagcgtagcgcctggccgttcacggtgtcg
aagagtaccattgacctgccgccgaagatgcaagacgcgctgtccgagttcacgaagtac
tacaagggcaagcatcaaggtcgtgtacttgactgggatcacgcgctggggactgcgacc
ttgactgcgagatttgacgctggggaaaaggagctgagcgtcagcctgtatcaggcggtc
gttctcctaatgttcgttgacgtacccaagcgaaccttcgcggaggtcaaggagctggcg
ggcaagctagacgatggggaccttcgacgaacgcttcagagccttgcctgcgggaagaag
cgtgttctactcaaggtccctccaggcaaggacgtccacaacggcgacgtcttccaattc
aacgcagaattcacggacagccagcgtagagtgcatatcaactccattcaggcgaaggtt
tctgcggaggaatcacagaagacgcagtacaccattgaaggagagcgcaagcacatcctg
gacgcggcaatcgtgcgcatcatgaagggcaagaaggagttgactctgcaggagctgcaa
agttcggttatcgccgcggtcgccaagcacttcataccggatgtcaagaaggtgaaaggg
cgcattgaggccatggtcgaacaggagtacatcgagcgcgttccggaaaagcagaacacc
ttcaggtatgttgcctga

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