Schizophyllum commune: SCHCO_02490005 Help Entry SCHCO_02490005    CDS       T01331                                  Symbol SCHCODRAFT_02490005 Name (RefSeq) antiviral helicase   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism scm  Schizophyllum commune Pathway scm03018   RNA degradation Brite KEGG Orthology (KO) [BR:scm00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     SCHCO_02490005 (SCHCODRAFT_02490005)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:scm03019]     SCHCO_02490005 (SCHCODRAFT_02490005) Enzymes [BR:scm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      SCHCO_02490005 (SCHCODRAFT_02490005) Messenger RNA biogenesis [BR:scm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      SCHCO_02490005 (SCHCODRAFT_02490005)   mRNA degradation factors    3'-5' decay     Ski complex      SCHCO_02490005 (SCHCODRAFT_02490005) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD MTR4_beta-barrel Ski2_N MTR4-like_stalk ResIII DEXQc_Suv3 Helicase_C ATPase_2 HTH_Tnp_ISL3 Motif Other DBs NCBI-GeneID:  9589678 NCBI-ProteinID:  XP_003038425 UniProt:  D8PMN8 LinkDB All DBs Position Unknown AA seq 1118 aa AA seqDB search MTRAPASSANFVRGKSGHVPFWPGGLEDAVISRGTGDISEEEKKQLRTVAPGLSRGLRLP GDPEEDDVLQELEGIYASEDAENGGEAEASNGHVEAEAPVAGSTEIDELLPTTRANLNPI KASQRKRPRTKIQKRDWAHVIDVNKPLNNFHELVPEMAHKYPFELDTFQKQAVYHLEMGD SVFVAAHTSAGKTVVAEYAIALAEKHMTRAIYTSPIKALSNQKYRDFKQTFSSQNVGILT GDVQINPEANCLIMTTEILRSMLYKGADLIRDVEFVIFDEVHYVNDAERGVVWEEVIIML PDHVSIILLSATVPNTKEFADWVGRTKKKDIYVISTAQRPVPLEHYLYAGRDLFKIVDAK RNFLALGYKEAGEALRRKQDKEREAAGLPPVQRVGARGGAQGQRGGRGGPPARGGRGAAP PARGGRGGSTGGRVVHMDKNLYVHLLGNLRKRNLLPVVVFTLSKKRCEENASTLTNQDLC TSVEKSEVHVAIEKALSRLKAPDRKLPQISRMRDLLSRGIGVHHGGLLPIVKELVEILFA RGLVKMLFATETFAMGVNMPAKSVVFSGIRKHDGRSFRDILPGEYTQMAGRAGRRGLDPT GTVIIVANDSLPEQTALHTMMLGTPGKLISQFRLTYNMILNLLRVEALRVEEMIKRSFSE NASQRLLPEQQKRVIEGEKTLAGLEKLACDICVPSIESYYDDMNDVVNMNQKLLSMAVSH PQGARLLSAGRVVVLNDGHFKKNTIAALLRQAPVQASDDGVLSKVKTYYVLALVDQATKS GDFADINPDAIPPTWPPAANSLAYDDPVYELSAVPLTSISLVEVDAIVDRHLISRMRDGI GQLGALVEEWSSAPEIPEIDWSRMRALEFQEILRERTRLVERSRDSVCLHCPDFGRHYTT IHAEKVLRANIANLKLAISDQNLELIPDYEQRIEVLKDLKFIDENCTVSLKGRVACEINS ANELVLTELILENTLANYDPEEVVALLSCFVFQEKTDAEPAIPPKLKEGMEAIMAISDRV GAVQDYHKVAAEDFRSNLKFGLVEVVYEWAKGMPFEQITALTDVAEGTIVRVITRLDETC REVRDAARVIGDAELFKKMEESQMKIKRDIVFAASLYF NT seq 3357 nt NT seq  +upstreamnt  +downstreamnt atgacgcgtgcgccagcatcgagcgcaaattttgttcgaggaaagtccgggcatgtacca ttctggccaggtggactggaggatgcagtcatcagtagagggacaggcgacattagcgag gaagaaaagaagcaactgaggaccgtcgcgcctggcctcagccgcgggttgcgtctcccg ggagatccggaggaggacgacgtcctacaggagcttgagggtatatacgcttctgaggac gccgaaaatggtggggaggcagaggcatccaatggccatgttgaggcggaggctcctgtg gccggtagtacagaaatcgacgagctcctaccgacgacacgtgccaacttaaaccccatc aaggcctcacagcgcaaacgtccgcgcaccaaaattcaaaagcgcgactgggcccatgtc atcgatgtcaacaagcctttgaacaactttcatgagctggttccggagatggcacacaaa tacccgttcgagctggacacgttccaaaagcaggccgtctatcatctcgagatgggcgat tcagtattcgtggcggcgcatacatcggcagggaagacggtcgtagccgagtacgcgatt gctctcgcagaaaagcatatgacacgcgccatctacacctctcccataaaagcgttgtcg aaccaaaagtatcgcgacttcaagcagacgttctcctctcaaaatgttggtattctgacg ggcgacgtacaaatcaacccggaggcgaactgcctcatcatgacaaccgagattctgcgt agtatgctgtacaagggcgccgacctcattcgagacgtcgagttcgtgatcttcgatgag gtgcactatgtgaacgacgctgagcgcggagtggtttgggaggaggtcatcatcatgctt cctgaccatgttagcatcatcttgctgtccgccacggtgccaaataccaaggaattcgcc gactgggttggtcgtacgaagaagaaggacatctacgtgatctcaaccgcccagcgaccg gtacccctagagcattatctctacgccggacgcgacttgttcaaaattgtggacgcgaag cgtaacttcctcgcacttgggtacaaggaagctggagaggctttgcggcgcaagcaggac aaggagcgcgaagctgccggacttcctcctgtacagcgcgtcggcgccagagggggcgcg cagggtcaacgaggggggcgtggtggcccgccagctcgcggcgggcgcggtgccgcacca cctgccagaggcggccgaggaggctctacaggaggacgcgtcgtccatatggataagaac ctctacgtccaccttctcggtaaccttcgcaagcgcaatctcttgccggtcgtggtcttt actctctcgaagaaacgctgtgaggaaaacgcgtcgacacttaccaatcaggacctttgc acgtccgtggagaagagtgaggtacacgtagctatcgagaaggcgctttctcgcttgaag gctccggacaggaagttgccacaaattagccgcatgcgagacctgctgagtcggggcatc ggtgttcatcatggaggtctgctgccaatcgtgaaggaactcgtggagatcctttttgcc cgtggtctggtcaagatgctctttgccactgaaacctttgccatgggagtgaacatgccc gcgaaatccgtagtgttttctggtatacgcaagcacgacggacggtctttccgtgatatc ctaccaggagagtacactcagatggcggggcgtgctggccgtcgtgggcttgaccctact ggtaccgtaatcatcgtagcgaacgacagccttcccgagcaaaccgcgctgcatacgatg atgttgggtactcccgggaagctcatctcccagttcaggttgacgtacaacatgatcctg aaccttctgcgcgtggaggcattgcgagtggaagaaatgatcaagcgaagcttctcggag aatgcctcacagcgactgcttcctgagcagcagaagagggtaatagagggcgagaagacg ctggccggactcgagaagctggcctgtgacatttgcgtcccaagcatagagtcgtactac gacgatatgaacgatgtcgtcaacatgaaccagaagctgctctctatggcggtatcccat ccccagggagcgcgtcttctgtcagcggggcgcgtggtcgtactaaacgacggacatttc aagaagaacactatcgctgcgctccttcggcaggctcccgtgcaggcctccgatgatggt gtcttgtcgaaggtcaagacttactacgtcctcgcactagtcgatcaggccacgaagagt ggtgacttcgcagacataaatccggacgcaatccccccaacgtggcctcccgcggccaat tctttagcttacgacgatccagtgtacgagctttccgctgtccccttgactagcatatcc cttgtcgaggtcgatgccatcgtggaccgtcatctcatctcgcgcatgcgggacggtatt ggccagctaggcgcgctcgtagaagaatggtcaagcgcaccagagataccagagatcgat tggtcgcgcatgcgcgctctggaattccaagagatcctgcgcgagagaacaagattagta gagcgctcgcgcgacagtgtttgcttacactgtcctgacttcggacgccattacacgacc atacacgccgagaaagtcctgcgcgccaacattgccaacctcaagcttgctatctccgac cagaacctggaactaattccagattacgagcaacgaatcgaggttctcaaggacttgaag ttcatcgacgagaactgcacagtatcgctgaagggccgcgtggcctgcgaaatcaattca gccaacgagcttgtgctcacggagttgatcctcgagaacactcttgcgaactatgatcct gaagaggtcgtggccctcctctcatgctttgtgttccaagagaagacggacgcagagcct gctataccacccaagctcaaagagggtatggaggcaatcatggccatcagcgaccgcgtc ggagccgtgcaagactaccacaaggtcgctgcagaggatttccgctccaacctcaagttc gggctcgttgaggtggtgtacgagtgggccaaaggcatgccgttcgagcagatcacagcc ttgacagacgtggccgaaggaaccatcgtcagggttatcactcgtctcgatgagacctgc cgtgaagtgagggatgcagcgagagtcataggagacgccgagttgttcaagaaaatggaa gaatcccagatgaagatcaagcgcgacattgtatttgctgcaagtctgtatttctag

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