Schizophyllum commune: SCHCO_02490024
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Entry
SCHCO_02490024 CDS
T01331
Symbol
SCHCODRAFT_02490024
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
scm
Schizophyllum commune
Pathway
scm03030
DNA replication
scm03410
Base excision repair
scm03420
Nucleotide excision repair
scm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHCO_02490024 (SCHCODRAFT_02490024)
03410 Base excision repair
SCHCO_02490024 (SCHCODRAFT_02490024)
03420 Nucleotide excision repair
SCHCO_02490024 (SCHCODRAFT_02490024)
03430 Mismatch repair
SCHCO_02490024 (SCHCODRAFT_02490024)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02490024 (SCHCODRAFT_02490024)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02490024 (SCHCODRAFT_02490024)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02490024 (SCHCODRAFT_02490024)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SCHCO_02490024 (SCHCODRAFT_02490024)
DNA Replication Termination Factors
ELG1-RFC complex
SCHCO_02490024 (SCHCODRAFT_02490024)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SCHCO_02490024 (SCHCODRAFT_02490024)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SCHCO_02490024 (SCHCODRAFT_02490024)
Check point factors
HRAD17(Rad24)-RFC complex
SCHCO_02490024 (SCHCODRAFT_02490024)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
RuvB_N
nSTAND3
Viral_helicase1
AAA_3
Rad17
Mg_chelatase
DNAX_ATPase_lid
NTPase_1
MeaB
AAA_assoc_2
Gp44_lid
AAA_19
AAA_11
AAA_24
RNA_helicase
AAA_28
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9594682
NCBI-ProteinID:
XP_003038810
UniProt:
D8PSA4
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MSSSSKAKATGPADAPYELPWVEKYRPQVLDDVVGNADTIDRLKVIARDGNCPHIIISGM
PGIGKTTSIHCLAHQLLGPAYKEGVLELNASDERGIDVVRNKIKNFAQKKVTLPPGRHKI
IILDEADSMTAGAQQALRRTMEIFSNTTRFCLACNMSNKIIEPIQSRCAILRYGKLKDQE
ILKRLLEICEAEKVEYNDDGLTALIFTAEGDMRQAINNLQSTWSGFGFVSGDNVFKVCDQ
PHPITIQTIIRCCLKGDIDGAMVKLTELWDQGYSAVDIVVTLFRVVKNFDEIPEYTKLEY
IKEIGFTHMRILEGVGTIIQLSGLLARLCKMNTKPELLRV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcgtcgaaagcgaaagccactgggccagcggatgcgccatatgagctccct
tgggtcgagaaataccgaccccaagtactggacgatgtggtcggcaatgcggacacgatc
gacaggttgaaggtcatcgcacgggacggaaactgcccgcatatcattatctcaggaatg
cccggtatcggaaagacaacgagtatacactgtcttgcgcatcagctactaggtcccgcc
tacaaggagggtgttctggaactgaatgcctcggatgagagaggaattgacgtcgtccga
aacaagatcaagaactttgcgcagaagaaggtcaccttgccaccagggcggcacaaaatt
atcatcttggacgaggctgacagcatgactgcaggcgcccaacaagcgctgcgacgaact
atggagatcttctcgaataccacccgtttctgcctcgcatgcaacatgagcaacaaaatc
attgaacctatacaaagtcgatgcgctattttgcggtacggcaagctgaaggaccaagag
atcctgaagcgcttgctggagatttgcgaggcggagaaggtcgaatataacgacgacggc
ctcaccgccctcatcttcaccgccgaaggcgacatgcggcaagccatcaacaacctgcaa
tctacctggtccggctttggctttgtctccggcgacaacgtcttcaaagtttgcgatcag
ccgcaccccatcaccattcagaccatcatccgatgttgcttgaagggcgatattgacggt
gcgatggtgaagctgacggagctgtgggatcaggggtacagtgcggtggatattgtagtg
acgttgttcagggtggtgaagaactttgacgagattccggagtacacaaaactggaatat
atcaaggaaatcggcttcacgcatatgcgtatactggagggtgtagggaccattatacag
ctgtctggattgcttgcgcgtttgtgtaagatgaacaccaagccagaactgttgcgcgta
tga
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