Schizophyllum commune: SCHCO_02500804
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Entry
SCHCO_02500804 CDS
T01331
Symbol
SCHCODRAFT_02500804
Name
(RefSeq) DNA polymerase epsilon, subunit B
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
scm
Schizophyllum commune
Pathway
scm03030
DNA replication
scm03410
Base excision repair
scm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHCO_02500804 (SCHCODRAFT_02500804)
03410 Base excision repair
SCHCO_02500804 (SCHCODRAFT_02500804)
03420 Nucleotide excision repair
SCHCO_02500804 (SCHCODRAFT_02500804)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02500804 (SCHCODRAFT_02500804)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02500804 (SCHCODRAFT_02500804)
Enzymes [BR:
scm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCHCO_02500804 (SCHCODRAFT_02500804)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
SCHCO_02500804 (SCHCODRAFT_02500804)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
SCHCO_02500804 (SCHCODRAFT_02500804)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
OB_POLE2
DNA_pol_D_N
Ig_NOMO
Motif
Other DBs
NCBI-GeneID:
9585915
NCBI-ProteinID:
XP_003036549
UniProt:
D8PPW6
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MKVNVDVLRRVFYSLQNANDDPGDLRQTLDADSHLFVVDSFEMPLWNWSPERGTFEKVNT
PLTVSGTPESRVLSVRNRLNIIKQCVLRNEHFAPSTLPSKDRERLLKSTKQLLGRAGERF
LLLGMLAHNKEGKLVLEDADGSVELDFTHLDEPGDGLFVEGCFALVEGEYTPDGALEVIA
IGQPPCEPRDVARSIYGHIDFLGKGATSLLEDTQFATRVQEDFENMQFFVLSDVWLDHPR
TLPGLRLMFENCVANDFVPKVIVLCGNFTTQSISHGDGRDIQRYQENFDALADLIASFPD
LTAATHFVFVPGPLDIALNGPVLPRKPLMSAFTARLRAKVPHVHFATNPCRIKFFHQEIV
VFREDLMARMLRNMVGVKPDVAGEDLKRYLVQTVLDQAHMSPFTLNIQPVLSDFDHSLRL
YPLPTAVVLADKYDRYKITYTGCHVFNPGSFASGKSYVFSTYQPSQVNSEECVIDMPIEN
Y
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaacgtcgacgtgctacgacgtgtcttctactcactacaaaacgcgaatgac
gatcctggggacctacggcaaacccttgatgccgattcgcatctcttcgtcgtcgactcc
ttcgagatgcctctgtggaactggtctcccgaacgaggtaccttcgaaaaagtgaacacg
ccactgacagtatctggaacgccagagtctcgcgtattgtccgtgcggaacagattgaac
attatcaagcaatgcgtcttgcgaaacgagcacttcgcgccgtctacattgccgtccaag
gatcgcgagcgccttctcaagtctacaaaacaactactcggtcgcgcaggagagcgcttc
ctcctgttgggcatgctggcgcataacaaggaaggaaagctcgtccttgaagacgcggac
ggtagtgtcgagcttgacttcacccatttggatgaaccgggtgatggcttattcgtcgag
ggctgcttcgcactggtagagggcgagtatacgccagacggggctttagaggttatagct
atcggacagccgccttgcgagccgagagacgttgcacggtcaatatatggccatatcgac
ttcctaggcaagggcgcgacctcacttttggaagatacccaatttgccacacgcgtccaa
gaagacttcgagaacatgcagttctttgtgctgtccgacgtctggttggatcacccgcga
acattaccagggctccgccttatgttcgaaaactgcgtcgccaacgacttcgtccccaaa
gtcatcgtcctatgcggcaacttcactacacagtccatctcccacggcgacggccgtgac
atccaacgataccaagaaaacttcgacgccctcgccgacctcatcgcctccttccccgac
ctcaccgccgccacccacttcgtcttcgttcccgggcccctcgacatcgccctcaacggc
cccgtcctcccccgcaagcccctcatgtccgccttcaccgcccgcctgcgcgccaaggtc
ccgcacgtgcacttcgcgacgaatccgtgccgtatcaagttcttccaccaggagattgtg
gtgtttagggaggacttgatggcgcggatgttgaggaatatggttggggtgaagccggat
gtggcgggggaggatttgaagagatatctcgtgcagacggtgttggaccaggcgcacatg
agcccgttcacactcaacatccagcctgtgctcagcgacttcgaccactcgctacggcta
tacccattaccaacggcggttgtgctcgcagacaagtacgaccgctacaaaatcacgtat
acgggttgccatgtgttcaatcctggtagctttgcgtcggggaagtcatatgtattctcg
acctaccagccttcgcaagtcaactctgaagaatgcgtgatcgacatgccgattgagaat
tactga
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