Schizophyllum commune: SCHCO_02501492
Help
Entry
SCHCO_02501492 CDS
T01331
Symbol
SCHCODRAFT_02501492
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02501492 (SCHCODRAFT_02501492)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02501492 (SCHCODRAFT_02501492)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02501492 (SCHCODRAFT_02501492)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_C
Nup188_N
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
9586078
NCBI-ProteinID:
XP_003036617
UniProt:
D8PQL1
LinkDB
All DBs
Position
Unknown
AA seq
1936 aa
AA seq
DB search
MVLTADKNDIKAATTISAKFNIDQVQALILLKLFLYNGGLHQASDADVADIDDRFTPFYY
TERLYLFRCLIPLFREEVNEEQWLYSVSSRFMPRLVPDARAFVEALIAEFEAKLRAPVPK
AMAGTVKDATTWAKQNAKEQLVLLEVLFWAMFGSVPRDGPTVERIYQSAYSTMMGTDQAN
ETLLLDAEGQQLRQDMAATWILITIEVLELENFADPTFLEISDNPANQESYLASPESLQR
IHKLVLEGDNSMFSLTYMAWALVLTKLAEKMQSMKQVPSKYAPFLQTLITGNAPKDREPV
PATMARKVLESGDLFDMLRMLLTTSPLFVASLAWRRDSSVTDTNPIAFRSVMKGFLISVL
DVIPVESIPDFYSLVDIWVALFGRSEVESIYLLCHQYWRMDWHQGPSRRAIFDVARARFP
VDFVPLPRLCRAMAACGFLDTDPLATTSDMQSGGYEEQKECAQNAFDYFNALPTYAQHIT
LNNEAHRLYERQAERASRSGPMEIHYITQHPIRLPGGSILPAGTHGRLVAGDERTWVVVD
WKHRHSGWKLIAEVLTRYVNKKRLSGSSAGYEDVFFGKRQNTETRTLRLDDIGVQMDDET
EVTAIIEALDLIRSVIQDHPDLAERLIDTLEDGFPVVSHTMTETTPPDLVQLTTMILEDA
LTSANPRKRAPAELVTAAVGVLAALLPLQGRAARVWLFLKSTSALFGNDRAASAASNAFA
VERVTGQYTMTLAVLNLVQRLFDQAYSTITPDNEELTRTKEEVLLRAARFIHTEIWVEHM
TWKYAQLGDRFEIGRRVLRFYTNILEHSPPNVAERPFPRLSQAVADVWLFHASAASVMPL
VASLTTGKSALDVLHKEQRVADIRKLVFLLQAALKLTRILLTQKQMSEMSTKASLLEQYL
CTRSVTGGFSDLTTGGSDPVEVLASYVKQIGAGTVVPLEAMRVLSSLCTSLSTINPPPST
ILAHLSNPEHTVAELVHIAREVFNHPPLRIAIWHFMALTVEKEPALGRLFISGTSFSLSD
IKGKGKAIAEKPNPSVLKGSTRKVVGMDAALDILKDWSDLWDFNPQLLDAVLNFVSAVWQ
RGLENRAILGPLRSDEAFWKRIAGAASREKDPPPDCMTTETIVIDGVPHSDQHAEVSMYA
YRTLAQAHATSILGSDISMQVQENTGKAKPEKALSFSMIEKWFKSDDLNEVILHAATATY
NPELYDKATATLEKKYPGLTLDQVRLSDPVHDRELGDGFAFSLEHAERRMAAYVPEDDGM
AVDDHLQLQIMSINLNLSLTHGFSHLATSWQFLLQQLGPYLRGDKDARKHILEAYTAIAH
DVAAEKHPGDMKAIVHGQRLGILLALLELAWFWSEEKDDSIEIFSDGMANTRGIISNPAQ
PPAASFLGKISVPFHQTLLQILYYCAKQSRNLLARRKLVNADQRLRIATTIDAILALVID
GLRIVFLAIRSKPDLDLDRDLELLVAVFEQCIRRDINSSPSQWLARCRETDVVRESLEIY
SKLDLAGLTDLPLLNLRKQPLYSPHIMRLHMALATVPEAAEMLASNGVLLAYSNCSISAA
IRSGAIDVAIPELPGERSPAHVAYCSMLAVISAVLFALGRETHYLDAEASGFVQLCSAQI
VRTMSWTATDPISLATMEEMEQTVNVFFALAEGSLTSASGTSHIDQVLYAFKVHGLMLLQ
HVNHAVTHPRRVASLFEPVTPQDRLANEKDASPPVAHLLHRLMKLAGSIVSVLVTISRAE
SIMMRERDTWPAEEAIILPQNKVVLGERASLGTLLELGNCALDQLRDLLAKAPTAKPTDK
GKAILTGTYETKEDVHAGISVARRTLEVVLTYSVTQLALYLNKPDTELGNRDVEFDEAQP
GAMDVTPATKAADRLRRGLISDTVDDLESLMQKAKPLIAKSGTTLGKDLVDVSQILENFF
KDHVSGPAKVRLSNSS
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcaccgcggacaagaacgacatcaaggcagcgacgacgatcagcgccaagttc
aacatcgaccaagtccaagcactcattctcctcaaactcttcctctacaatggaggtcta
caccaagcctctgatgccgatgtggccgacattgacgaccgcttcacgccgttctactat
accgagcgcttgtacctcttccgatgcctcattcccctgttccgcgaggaggtgaacgag
gagcagtggctatactccgtgtcttctcgcttcatgccgcgcctggtgcccgatgcgcgc
gctttcgtggaggcgctcatcgctgagttcgaggccaagctgcgtgcacctgttccaaag
gcgatggcagggactgtcaaggacgcgactacttgggcgaagcagaatgccaaggaacaa
ctcgtgctcctcgaggtgctcttctgggcgatgtttgggtctgtgccacgagatggaccc
acagttgagcgcatctatcagagcgcgtactcgactatgatgggcacagaccaggcaaac
gaaacgctgctattggatgcagaaggccagcaactgcgccaggacatggctgcgacctgg
attctcatcacaatcgaagtgctcgagctggagaacttcgcggacccaaccttcctcgag
atctcagacaaccctgcgaaccaggagagctaccttgcgtcgccagaatctctgcagcgg
atacacaaactcgtgctagagggcgacaacagcatgttctcactgacatacatggcgtgg
gcactcgtcctgacgaagctggcggagaagatgcagagcatgaagcaggtgccgtcgaag
tatgcgcccttcctgcaaaccctcatcactggcaatgcgccgaaagaccgcgaaccagta
cccgccacgatggcaagaaaggttctagagagcggcgacctctttgacatgctcaggatg
ctgttaacgacctcgcccttgttcgttgcgtcactggcctggaggagagactcatccgtg
acagacacaaacccaatcgccttccgcagtgtcatgaaaggcttcctcatcagcgtgctc
gatgtcatacccgtggaatccatacccgacttctatagcctcgtcgacatctgggttgct
ctcttcggccgcagcgaagtcgagtctatctatctgctatgtcaccagtactggcgaatg
gactggcatcaaggaccgtccaggcgagccatctttgacgtcgctcgcgcacgcttcccc
gtcgacttcgtcccccttcctcgcctctgccgcgccatggctgcatgcggcttcctcgat
accgatccgctcgccacaacgtcagacatgcagtcgggaggctacgaggagcagaaggag
tgcgcgcagaacgcctttgactacttcaacgccctgccgacgtatgcgcagcatattacc
ctgaataacgaggcgcatcgactgtacgagcgacaagcggagcgtgcgtcgcgcagtgga
ccgatggagattcactacatcacccagcatcccatccgtctgccgggcgggtccatactg
cccgcgggtacccatgggcgccttgttgctggagatgagaggacatgggtagtcgttgac
tggaagcaccggcactctggctggaagctcatcgccgaggtcctgacgcgatatgtcaac
aagaagcggctttccggctcgtcggcggggtacgaggacgttttcttcggcaagcgtcag
aacacggagacgcggacgctgcggttggacgacatcggcgtgcagatggacgacgagacg
gaggtcactgcgattatcgaggcgctggacctgattcggagcgtcatccaggatcacccc
gacctcgctgaacgcttgattgacacactggaagacggctttccggtcgtgtcgcatacg
atgacggagaccacaccgccggacctggtgcagctcacgacgatgatcctcgaagacgcg
ctaacgtcggcaaacccaaggaaacgcgcacctgcggaacttgttaccgcggctgtgggc
gtgctcgctgctcttctccctctccagggccgagcggcccgcgtctggctgttcctcaaa
tccacatctgcgctctttggcaatgaccgtgcggcgagtgcagcgtcgaatgcctttgca
gtcgagcgtgtaacaggccagtacaccatgaccctggccgtcctcaacctcgtccagcgg
ctattcgaccaggcctacagcacgatcacgcccgacaacgaggagctgacgcgcacaaag
gaggaggtgctcctgcgtgccgcgcgcttcatccacaccgagatctgggtcgagcacatg
acgtggaagtacgcgcagctgggcgacaggttcgagattgggcgccgcgtcctgcgcttc
tacaccaacatcctcgagcactcgccgccgaatgtggcggagcggccgttcccgcggttg
agccaggcggtcgcggacgtgtggctcttccacgcgagcgcggcgtcggtgatgcctctc
gtggcgagtctgacgacggggaagagcgcgctggatgtgctgcataaggagcagcgggtg
gcggacattcgcaaactggtgttcctgctgcaggcggcgctcaagctgacgcgcatacta
ttaacgcagaagcagatgtcggaaatgtcgacgaaggcgagcctgcttgagcagtacctc
tgcacccgatcggtcactggcgggtttagcgacctgaccacaggtggttcagatcctgtc
gaggtgctagcatcgtatgtcaagcagatcggcgcggggactgtcgtgcctttagaggca
atgcgcgtcttgtcaagtctgtgcacctccctatccactattaacccgccgccctcgact
atcttggcccatttgtcgaacccggagcatactgttgctgagctggtgcacatcgcccgc
gaagtcttcaatcacccgccgcttcgtatcgctatttggcacttcatggcgctgacagtg
gaaaaagagcctgcgctcggccgtctcttcatctctgggacctcgttctcgctgagcgat
atcaagggcaagggcaaagctatcgcagagaagcctaacccctcggtgctcaagggcagc
acgcgaaaagtagtcgggatggacgctgccttagacatcctgaaggactggtcggaccta
tgggacttcaaccctcaactccttgacgcagtactcaacttcgtgagtgcggtctggcag
cgcggcctcgagaatagggcgatcttgggaccgctacgctcggacgaagcattttggaag
aggatagcaggagctgcatcacgagagaaggatccgcctccggactgcatgacaacggag
accatagtcatcgacggagtgccgcactccgaccaacatgcggaagtgtccatgtacgcc
tatcggacactggcgcaagcgcacgcgacgagcatcctggggtccgacattagcatgcag
gtgcaggagaatacggggaaagcgaagccggagaaggcgctcagcttctcgatgattgag
aagtggttcaagtcggacgatctgaacgaagtcatcctccatgccgcgactgcgacctac
aatccagagctctacgacaaggcgacagcgacactggagaaaaagtatcccggactcaca
ctcgaccaagtacggttatccgatcctgttcatgaccgtgaacttggagacgggttcgcc
ttctctctggaacacgccgaaaggcgaatggcggcgtatgtgcctgaggacgatgggatg
gccgttgacgaccacctgcagctgcagatcatgtccatcaacctgaacctctctctgaca
catggcttctcgcatcttgcaacgtcctggcaattcctccttcagcaactagggccctac
ttacgcggagacaaggacgctcgcaagcacatcctcgaagcgtacaccgccatcgcgcat
gatgttgccgctgagaagcatcccggagacatgaaagccatcgtgcacggtcaacgatta
ggcatattattggctctgctggagctcgcatggttctggtcggaggaaaaggacgactcc
atcgagatattctcggacggtatggccaacacgcgcggcatcatatccaacccagcacag
cctcccgctgcctcttttctgggcaagatctccgtacccttccaccaaaccctcctgcag
atcttgtactactgcgccaagcagagccgaaatctcctcgcccgccgaaaactcgtcaac
gccgaccagcgactacggatagccaccaccatcgacgccatcctggcccttgtcatcgac
ggcctccgtattgtcttcctcgctatccgcagcaaacctgaccttgatctcgaccgggac
ttggagctcctcgttgccgtcttcgagcagtgcatacgccgagacatcaactcgtcgcca
tcacagtggttggcgcgatgtcgagaaacagacgtcgtgcgggaaagccttgagatatac
tcgaagttggacctggccggactgacggacctccccttgctgaacctgcgcaagcaaccg
ctctactctccgcacatcatgcgcctccatatggccctcgcgaccgttccagaggcagca
gagatgctcgcgtcaaacggcgtcctgctggcttacagcaactgctcaatcagcgccgct
atccgctcaggggcaatcgacgtcgcgatcccagagctcccgggcgagcggagtcccgcg
catgtcgcctactgctcgatgttggccgttatctctgcggtgctcttcgctctcgggcgc
gagacgcactacctggacgcggaggcgagcggcttcgtgcagctctgcagtgcgcagatc
gtgcggaccatgtcgtggacagcgacggacccgatatcgctggccacgatggaggagatg
gagcagacggtcaatgtgttcttcgctctcgcggaggggtccttgacgtcggcgagcggg
accagtcatatcgaccaggtgctatacgcgttcaaggtccatggcttgatgttgctccag
cacgtcaaccatgcggtgacgcatccgcggcgggtggccagtctcttcgagccggtgacc
ccgcaagaccggctggcgaacgagaaggacgcgtcgccgcctgtggctcaccttttgcac
cggttgatgaagcttgcggggtcgattgtatctgtcttggtcacgatcagtcgcgcagag
tcaatcatgatgcgggagcgagacacttggccagctgaggaggccatcattctgcctcaa
aacaaggtcgtactcggcgagcgggcctcactaggcacgctgcttgaacttgggaactgc
gcgctagatcagctgcgcgatctcctcgcgaaagcgccgaccgcgaagcccactgacaag
ggcaaggctatcctcaccggaacctacgagaccaaagaggacgtgcatgccggcatctcc
gtcgcacggcgcaccctcgaggtcgtcctcacctactccgtcactcagctcgcgctatac
ctcaacaagcccgacaccgagctcggcaaccgtgacgtcgagttcgatgaggcgcagccc
ggagcgatggacgtgacgccggcgacgaaggcggcggataggttgcggcgggggctgatc
agcgacacggtggacgacttggagtccttgatgcagaaggcgaagccgctgattgcgaag
agcgggacgacgcttgggaaggacctcgtcgacgtgagccagatcttggagaacttcttc
aaggatcatgtgtccgggccagcaaaggtacgtttgtctaattcatcgtga
DBGET
integrated database retrieval system
