Schizophyllum commune: SCHCO_02507947
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Entry
SCHCO_02507947 CDS
T01331
Symbol
SCHCODRAFT_02507947
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
scm
Schizophyllum commune
Pathway
scm03022
Basal transcription factors
scm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCHCO_02507947 (SCHCODRAFT_02507947)
09124 Replication and repair
03420 Nucleotide excision repair
SCHCO_02507947 (SCHCODRAFT_02507947)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scm03021
]
SCHCO_02507947 (SCHCODRAFT_02507947)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02507947 (SCHCODRAFT_02507947)
Transcription machinery [BR:
scm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SCHCO_02507947 (SCHCODRAFT_02507947)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SCHCO_02507947 (SCHCODRAFT_02507947)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
TraU
DUF4164
Motif
Other DBs
NCBI-GeneID:
9587910
NCBI-ProteinID:
XP_003030420
UniProt:
D8Q8Q3
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MQGQKRGKSGQLVDPRPQTIDGEAKIVITPQLVHDIFDEYPIVQTAYAENVPDKLTEAQF
WKRYFSSKLFHAHQASIRSSATQFVAKEDPIFDKYLEKDDDGLEPRRPRTETVSMLVDLA
TTSEDHGEAGTTKDITMQAGRQKGAIPLIRKFNDHSERLLNAALGELPKAKRRRLNNAQD
EYEAEIELDDLRDEQTSEGITLAMQDRQRYYEGIASQSAVEDTPPMRANPRGLAASIQDW
SNSLASLRIVRGPSDAALMSMTQNVMQRLTVKAQKNDFPPDLFRQMASCQTAANEFLRQF
WGALYPRAGDQPAAGNANPAQRAAKAAKMANFLARTPEKVDALVRQAEEMGADGKRVRVA
LQPVLNAVERALSVHKARMAARPGGAGTGSRPGTPR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtcaaaagcgcgggaagtctggccagctggtcgacccacgacctcagacgatc
gacggcgaggccaagatcgtcatcacaccacagctggtccacgacatcttcgacgaatac
cctattgtgcagactgcctacgcggagaacgtgcccgacaagcttaccgaagctcaattc
tggaaacgctacttctcgtcgaaactcttccatgcacaccaagcgtctattcgatcatct
gcaacgcagtttgtggcaaaggaggatccaatattcgacaagtacctcgagaaagatgat
gacggtcttgagcctcgcagaccgcgaacagagactgtcagcatgctcgtcgacctcgca
actacctccgaggatcatggcgaagcgggaaccacgaaggatatcaccatgcaggccggt
cgccagaaaggcgcgatacccttgatacggaagtttaatgaccactcagaaagattactg
aatgccgccttgggcgagcttcccaaggcaaagcgaagaagattgaacaacgctcaggac
gagtacgaagctgagatcgagctcgacgatctgcgagacgagcagacatccgagggcatc
acacttgctatgcaggaccgacaacgatactatgagggtatcgctagtcagtctgctgta
gaggatactcccccaatgcgcgcgaacccgcgaggtcttgcggctagcatacaggactgg
tcgaactcgttggcatctcttcgaattgtgcgagggccgagtgacgcagcgcttatgtcc
atgacacagaatgtcatgcaacgcctaacagtcaaggcgcagaagaacgacttcccgccc
gacctcttccgccaaatggcctcctgtcagacagccgccaacgagttcctccgccaattc
tggggcgccctctacccacgcgcaggcgaccagccagctgctggtaatgccaaccccgcc
caacgcgccgcgaaggcggcgaagatggcaaacttcctcgcacggacgccggagaaggtg
gacgcattggtgcggcaggcggaggagatgggcgcggatggcaagcgggtgagggtggcg
ctgcagccggtgctgaatgcggtggagagggcgctgagtgtgcataaggcacggatggct
gcgaggccgggaggggcggggactggctcgaggccggggacgccgaggtag
DBGET
integrated database retrieval system
