KEGG   Schizophyllum commune: SCHCO_02520852
Entry
SCHCO_02520852    CDS       T01331                                 
Symbol
SCHCODRAFT_02520852
Name
(RefSeq) WD40 repeat-like protein
  KO
K20409  SEA/GATOR complex protein SEA3/WDR59
Organism
scm  Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:scm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scm04131]
    SCHCO_02520852 (SCHCODRAFT_02520852)
Membrane trafficking [BR:scm04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    SCHCO_02520852 (SCHCODRAFT_02520852)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_RIG_2nd DSE1_N WD40 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_Aladin Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WDR55 RWD PAC11 Beta-prop_CAF1B_HIR1 WD_LRWD1 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 74629460
NCBI-ProteinID: XP_050197181
LinkDB
Position
Unknown
AA seq 1172 aa
MPAVPERQGLDRSPPASSPLRLPVEDLDDTDSSALDEDHVDVEAPSSAEEGAHFGQSLQI
DMKTLVGDAVGNISISPSSRDLVLAARRGLFIIDLEAPLEVPRFLPQGGTWDVADVQWSP
HTARSEYIVSTSSEKLLIWNLMLQGKTSIQHVLHSHYRAITDINWHTSEYDTVISTGIDS
WLWAWDLRQPRKPSIGLCAFHGLSAGGGTHVKWNRHDPNVIASAHTNEVLIWDRRNGSLP
TARIPAHRSKIYGLDWSHTARNELVTCSLDRTIKFWDINCLSDTPGVQSSEAKATIHTSY
PVWRARNLPFGEGVMSLPQRGGTALELYARDNLEEPIEAFEGHTDVVKEFVWRNGEQDDF
QLITWSKDRTLRFWPVDHETLHRVGHVFGENRGRTGKRPSLDVQSYRDVTFRGPTETTPQ
SMLSAPIGNRSILAEVRALPPSMTTTSAPVVLGGGAEKPTSAHGRISNTRHVPIPHTIAS
LKKTGTMSKGSVTGKSVATQMDAFTWLSKVRVGGRRGSSSGRGSDVSPSGSQSRPASAVR
GRSINRIESDSEDEKEEQSLADEILSVVKKLAEHKIKLEKADLTKKRTCTLGLHGPWGEK
SSVFLRVTFTFPKDYPHAQHPGGTPSVEVERSPLISMKDYVFILRRLRTIRQHRRPCLEA
CLRFLLFAREDEHARGPLYPDSESSSDEDEAGKSRDVTVSLLRNNKNLTEPRTLQGAFGP
NGELVCFFRAPPRIVRTLMPDVSGSPDETGKVTPKLFKHPALIFDAVDRLGSFTPERPSK
PYPRRPGRGEADNIARIMTNLLTFSPLQYRPELASHAEDQPQSYVLPMRRSTIAVTNTMG
LAGPERKVAVDYVFLGDSLEDVCRANAEAARVHGRYDHQRVFEALAALFPALEDENGPHR
YKKMSAAQQVVMKYFEDFCVAKDVQMLGMLSSVILQAFDHHQLGAIQPKSPVTAMHTRRS
TPLSANVANLDYFTTRRSRTSPHSPPWHRSGNDSPSRNFINAAISSSNSSRGSWSSLFNT
GTMRQYLAGVQDTLREGLATPSTDTLPPTPKLPPTPTTPLTPRPTIPVPTSKVLRGPDSP
IPRARRPRQNSILAPLNEPMSKSWNESFFGSNPGPSPPVVQSSYSSAGSGNNRVGQRSRR
PTFSRVPPPKTITTVTEKRLVFKEEMMLAEGR
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgccagctgttcccgagaggcagggtttggacaggtctccgccggcgtcgagtccgcta
cgactgccggtggaggaccttgatgatacagacagctcagccttggacgaggaccacgtg
gatgttgaagcaccgtcctcagcagaggagggcgcgcacttcggtcagagccttcagatc
gacatgaagacgctcgtgggcgatgcagtgggcaatattagcatcagcccatcctcgagg
gaccttgttcttgctgcacgccgcggcctgttcatcattgatttggaagcaccgcttgaa
gtaccccgtttcctgcctcagggagggacatgggatgtcgcagacgtgcaatggagccct
catacggctcgctcagaatatatagtctccacttctagcgagaaactgctaatatggaat
ctcatgttgcaagggaagacgtcaatacagcacgtactgcactcgcactaccgtgctatc
acggatataaactggcacacgagcgagtacgacaccgtcatcagcaccggcattgactcc
tggttatgggcgtgggatctgcgccaacctcggaagccaagcataggtctttgcgctttt
catggactttcagcgggcggagggacgcatgtcaagtggaatcgccacgaccccaacgtc
atcgcatctgcgcacacgaacgaggttctcatctgggatcgcagaaatggctctttacca
accgcacgcatacccgcccacagatcgaaaatttacggactagattggtcccacactgca
cggaatgaactcgtcacctgctcactcgaccgcactatcaagttctgggatatcaactgc
ctctcagacacgcccggcgttcaatcgtctgaggcaaaggcgactattcacacctcgtac
ccggtctggcgagcgaggaacttgccttttggcgagggtgtgatgagcttgcctcagcga
ggggggactgcgctggaactgtacgcgagggataacttggaagagcctatcgaagcgttt
gaaggccatacagatgttgtcaaggagttcgtgtggcgcaatggcgaacaggatgacttc
cagcttataacttggtcgaaggatcgtaccctgcgcttctggcctgttgaccatgaaaca
ctacatcgcgtcggtcatgtatttggcgagaacaggggtcgcacaggcaagcgcccctcg
ctcgacgtccaaagctaccgggacgtcaccttccgcggccccaccgagaccacaccgcaa
tccatgctctctgcccccatcggcaaccgctccatcctcgccgaagtgcgagccctcccg
cccagcatgaccaccacctccgctccagtggtcctcggtggtggcgcggagaaacccacc
agcgcccacggacgcatctccaacacgcgccacgttcccatcccccacaccatcgcgagc
ctgaagaagacggggacgatgagcaaggggagcgtgacggggaagtcggtcgcgacgcag
atggatgcgttcacttggctgtcgaaggtgcgggtgggtgggaggagggggagtagttcg
gggcgggggagcgatgtgagcccgagtgggtctcagtcgaggccggcgtcggcggtgagg
gggaggagtatcaatcggatcgagagcgatagcgaggacgagaaggaggagcagtcgctg
gcggatgagatcctgtccgtcgtcaagaagctggcagagcacaaaattaagctggagaag
gccgacctgactaagaagcgcacctgcactctaggcttgcacggcccttggggcgagaag
tcgtctgtctttctccgtgtcaccttcacctttccgaaggactacccacacgcccaacat
ccgggcggcaccccaagcgttgaagtcgagcgcagtcctttgatctcgatgaaggactac
gttttcatcctccgccgcttgcggacaatccgacagcaccggagaccttgcctagaggct
tgtttgcgcttcctcctgttcgccagggaggacgagcatgctcgggggccactgtatcct
gactcggaatcgtcgtcagatgaggacgaagctgggaagtcgagggatgtgacggtatct
ttgttgcggaacaataagaacctgacagagccgaggacactgcagggcgctttcgggccc
aatggagagctcgtctgcttcttccgcgcgcctccccgcatcgtccgcaccctcatgccc
gacgtctccggctcccccgacgagacaggaaaggtcactccaaagctcttcaagcacccc
gccctcatcttcgacgccgtcgaccgcctgggcagcttcacccccgagcgacccagtaag
ccctacccccgccggcctggtcggggggaggccgacaacattgcgcgcatcatgacgaac
ctgctcactttctcccccttacaataccgccccgagctcgcgtcgcacgccgaggaccag
ccacagagctatgtgctgccgatgcggcggagcacgatcgcggtgacgaacacaatgggg
ctggcggggccggagaggaaggtggcggtggattatgtgtttttgggagactcgttggag
gatgtgtgtagagcgaatgcggaggcggcgagggtgcatgggaggtatgatcatcagagg
gtgtttgaggcgcttgcggcgttgtttccggcgttggaagacgagaatggaccgcatagg
tataagaagatgagcgcggcgcagcaggtagtgatgaagtacttcgaagatttctgcgtt
gcgaaagacgtgcaaatgctggggatgctgtcgtctgtcatcctccaggcattcgaccat
caccagctcggggcaatacagccgaaatccccagtgaccgctatgcacactcgtcgctca
acccctctgtcggccaacgttgccaatctggactactttaccacccgacgttcgcgtacg
agtcctcactctccaccttggcatcggtccgggaacgattccccttcgcgcaatttcatc
aacgctgcgatttcctcctccaactcatctcgtggctcatggtccagtctcttcaatact
ggcacaatgcggcagtaccttgcaggcgtgcaagataccctccgcgaaggcctcgccacc
ccttcgaccgacaccctcccacctacgcccaaacttccgcccacgcctaccacaccctta
actcctcgaccaacaatccccgtcccaactagcaaagtacttcgcgggcccgactcgccc
atccctcgagctcggaggccacggcagaactcgatcctcgccccactgaacgagccgatg
tcgaagtcttggaacgagtcgttcttcgggtcgaatccaggaccttcaccgccggtagtg
cagtcctcatactcgtcggcggggtctgggaataacagggtagggcagcgctcgaggcgg
ccgacgttctcgagggtgccgccgccgaagacgataacgacggtgacggagaagcggttg
gtgttcaaggaggagatgatgctggcggaggggaggtga

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