Schizophyllum commune: SCHCO_02523785
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Entry
SCHCO_02523785 CDS
T01331
Symbol
SCHCODRAFT_02523785
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scm03021
]
SCHCO_02523785 (SCHCODRAFT_02523785)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02523785 (SCHCODRAFT_02523785)
Transcription machinery [BR:
scm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SCHCO_02523785 (SCHCODRAFT_02523785)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SCHCO_02523785 (SCHCODRAFT_02523785)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_9
SH2
HHH_3
Tex_YqgF
CTP_transf_like
Motif
Other DBs
NCBI-GeneID:
9594640
NCBI-ProteinID:
XP_003036187
UniProt:
D8PTB3
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MSSPPPAEYAPEPVGEDVPMQDAEQQEPPPEDEDAEGDVVMPGADDDSSEEGEDDEEEER
RIRQGFIVDEDEEEEEDEEEARRERRSKRRKKKHRHRRREEEEALEEDDLELLEENTGTS
FRRNNLTRLRRGRDSESPPAGSRRRKNVIDSDDDLDDDIALPKPGDVQAIFDDDRGRDDD
EEYGSDDFIDYDEEEDGAMDEETRQERREERRRQEAERRRRVRSALPQLAGIDAGALDEM
HDIFGGDDYDWALEADEEIAEPTEQPETRYQDVFEPSEIRNRLLTEDDDLIRAQDIPERM
QLTSSGLSGSSAVIMPEPFSESDVQAAALWVTQRISNEINNTYFGQYAKHRELAGSLIMA
VTYAIRAMFVSGYEVPYIWTHKRDHIIHFDAAKARESNQDEAAMFGLLSLDDLWRIYTLG
QKFRALLERKRSLTASYARLKVEDDYYDTEIFPKLESVESIADATEWLMMKYKDKKQDAD
TFRFHDDNEEQIEAKKHKRPSRISAYEVAKNSIASRVAHGFGLTASQIVENFHAVSKKDG
KPVHFIEEFEQTPLAYAEQHIDPDPTKAKSPEELLAQARLILSTELGKDPNLRQAIRDVF
KSSAVFSVSPTERGITKIDVTHPFYAFKYLLDKPITEFLDTPQFLQILAAESEHLVTVSI
SLSPLAQQQFEDLLNDACTSDAFGESSKLWNAERRQAVHDAVEQHLIPAGRKWVRDYLRE
EIEDAMANKCGTALYERIHVAPWKSQTDTDTPLGAVPAVLAVSWGKGDVQRDPIHAVFVD
SEGRMRDYTQLENFHTQQPRDEFVDLIRRRNPDVIVIGGFSMATTKLSQRIKEILGEYSN
QGGLAPKPVVYVPDDVARIYQHSRRAAEEFTTLPTIARYCVGLARYTQGPLNEFAALGSD
VTAITLDEDLQQWVPKEKLLTAFERRLVDVTNKVGVDINRAVTDPYYQHLLPFVCGLGPR
KAQALVKKISAMGGSLTNREQFIKKGLLTTRIFLNAAGFLRINVNDMTSSASKKRAQMMD
VDEELASDPLDNTRIHPEDYELARKMAADALEYDEEDLHDVHPSHVVSVLMKEPDRQNKL
NDLNLVDFAISLLEANNEPKRHTLGMIRSELVNPFCEYRDPFPLLEAWDVLTMLSGETYK
TLRRGLIVSAAVMRIQPGKATLRLDSGVEAYVTEEYAADRPGRIDAALQKGQIVSAVVIE
HKFDIANDSLMLELSTRPMDLAPGDEQFRKVKPDMHWDDNREDKDKDIVERRKRAEERKT
RRVVKHPDFHNFNSKQAEEYLENQNRGDVVIRPSSKGTNHLAVTWKVDDGLYQHINVMEP
NADAAGTGVSNQLIVDPTHVYSDLDELIVNHVQAMARRVDDLMAHERFKKGPEDELHLYL
KQQLAANPKRSMYGFTLNRKKPGHFNLCFLASKGSTVQSWPVRVAPEAYYLFDAAAVGVS
ELCDAFKVRHLHESQNLANGGKTPYPGAGGRTPARGHATPGHMTSRGRTPNPYAGGVTPR
PPPPGGVTPRPPPPPNAFPGGPAPPPNAFGAPPMPPAPGFNGGWGAVPPAPPGGMVPPGM
NPQRAAMLQQAGGAGGWGGGSGGWGQ
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgccgccgcctgcagaatatgcaccggaacctgtcggggaggacgtccccatg
caggacgcagaacagcaggagccgccccctgaagacgaagatgcggaaggcgatgttgtg
atgccaggcgcagacgatgacagctcggaagaaggggaagacgacgaggaagaggaacgg
agaattcgtcaaggctttattgtggacgaggacgaggaggaagaggaagacgaggaagaa
gcgcgacgcgaacggcggagcaagcgccgcaagaagaagcaccggcacaggcgtcgggaa
gaggaggaggcacttgaggaggatgacttggagctccttgaagaaaatacgggcacgtct
ttccgacgcaataatttgactcgcctccgtcgcggtcgagactcagaatcccctcccgct
ggctcgcgcagacgcaagaacgtcattgattcggacgatgacctcgacgacgacattgcg
ctcccaaaacctggcgacgtgcaagctatctttgacgacgatcgaggccgggacgacgac
gaggaatacggctccgacgacttcatcgactacgacgaagaggaggatggcgccatggac
gaggaaacgcgtcaggagcgcagggaggagcgtcgcagacaagaagcggagcggcggagg
cgcgtcaggagcgcattgccacagctggcgggtatcgacgctggcgccctcgacgagatg
cacgatatatttggcggagacgattatgattgggctctagaggcggacgaggagattgcg
gagccaacagagcagccggagacccgctaccaggacgtctttgagccatcagaaattcgc
aacagactgctcaccgaggacgatgacctcattcgcgctcaagacattccagagcgcatg
cagctcacttcctctgggctttccggctcgtctgcggtgataatgccggagcccttttcc
gagtctgacgtgcaagccgctgccctctgggtcacccagcgcatctccaacgagatcaac
aacacctatttcggccagtatgcgaaacacagggagctcgccgggtcgctgatcatggcc
gtcacgtatgctattcgcgcgatgttcgtgtccggctacgaggtcccgtacatctggacg
cacaagcgggaccacatcatccacttcgatgcggcaaaggccagggaatcgaatcaggat
gaggcggcgatgttcgggctgctgtcgttggacgatctatggcgcatctacacgctaggg
cagaaattccgcgcactcttagaacggaagcggtcactcactgcgtcatatgcgcgcttg
aaggtagaggacgactactacgacacggaaatcttcccgaaactggagagcgtggagtct
atcgccgacgcaaccgagtggctcatgatgaagtacaaggacaagaagcaggacgcggac
accttccgcttccacgacgacaacgaggagcagattgaggcaaagaaacacaagcgcccg
agtcgaatatccgcatacgaggtggcgaagaacagcatcgctagccgggtcgcgcatggc
tttggcctcactgccagccagatcgtcgagaacttccacgcggtgtcgaagaaggatgga
aagcccgtgcacttcatcgaagagttcgagcaaacaccccttgcttacgcggagcagcac
atcgaccccgatcccaccaaagcgaagtcgcctgaagagctgctcgctcaagcgcgcttg
atcttgtcgacggagcttggcaaggaccctaatctgcgccaggccattcgcgacgtcttc
aagagttctgccgtcttcagcgtcagtccgaccgagcgaggtattacgaagattgacgtg
acgcatcctttctatgccttcaagtacctgttggacaagccgattaccgagttcttggac
acgccacagttccttcagatcctcgccgctgaatctgagcacttggtcacggtttccata
tcgctctcaccgctcgcccagcaacagtttgaggacctgctcaacgatgcttgcacgtca
gatgcgttcggcgagtcctcaaaattgtggaacgcggagcggcggcaggctgttcacgac
gcagtcgagcagcacctcatccctgctgggcggaagtgggtgcgcgactatctgcgggag
gaaatcgaggacgcgatggcgaataagtgtgggacggctttgtacgagcgcatccacgtc
gcgccttggaagtcgcagacagatactgacacgccgttgggtgcagtccctgcggttctc
gctgtgtcgtggggcaagggggacgtccagcgcgatcccatccacgccgtgttcgtcgac
tcagagggtcgtatgcgggactacactcagctggagaacttccacacccagcagccccgc
gacgagttcgtcgacctcatacggcgtcgcaacccggacgtcatcgtcattggcggcttt
tcgatggcgaccacgaagctctcgcagcgtatcaaggagatcttgggggagtacagcaac
cagggcggccttgcgccgaagcccgttgtgtacgtccccgacgatgttgcgcggatctat
cagcatagtcggcgggcggcggaggagttcacgacgttgcccacgattgcgcgctactgc
gtgggtcttgcgcgctatactcagggacccctcaacgagtttgcggcgttgggctcggat
gttacggccatcaccctcgacgaggacttgcaacaatgggtgcctaaggagaagctgctg
accgccttcgagcgccggctggtcgacgtcacgaataaagtcggcgtggatatcaatcgc
gcggtgacggatccgtactaccagcacttgttaccgttcgtgtgcggtctgggtccacgt
aaagcgcaagctctggtcaagaagatctcggcgatgggcggaagcttgaccaacagggag
cagttcatcaagaaaggccttctgacaaccaggatcttcttgaatgctgctgggtttcta
cggatcaacgtcaacgacatgacgtcgtccgcgtccaagaagcgcgcgcagatgatggac
gtcgacgaggagctggcaagcgaccccttggacaacacgcgtatacatcccgaagactac
gagctcgcgcgcaagatggctgccgacgctcttgagtacgatgaagaggatctccacgac
gtccatccctcgcacgtcgtctccgtcctcatgaaggaaccggaccggcagaacaagctc
aacgatctcaacctcgtggacttcgcgatcagcttgctcgaggcgaacaacgaacccaag
aggcatacgctcggcatgattcgcagcgagctcgtcaacccgttctgcgagtatcgggat
cctttcccgcttttggaagcttgggatgtcctgacaatgctgagcggggagacgtacaag
acgctgcgtcgtggtcttatcgtttcggccgccgtcatgcgcatacaacccggcaaggcg
acgctcagattagactccggagtcgaggcatatgttaccgaagagtacgccgcggatcgc
cctgggcgaatcgacgccgcgctgcagaaagggcagatcgtctccgccgtcgtcattgag
cacaagttcgacatcgccaacgactcgctgatgctcgagctgtccacccgtcctatggac
ttggcccctggtgacgaacagttccgcaaggtcaagcccgacatgcactgggacgacaac
cgggaggacaaggacaaagacatcgtggagcgcaggaagcgggccgaggagcggaagacg
cgccgtgtcgtcaagcacccggacttccacaacttcaacagcaagcaggcggaggagtat
ctggaaaaccagaaccgcggcgacgtcgtgatacgcccgtcctcgaagggcacgaatcac
ctcgcggtcacttggaaggttgacgatggcctgtaccagcacatcaacgttatggaaccc
aacgcagacgctgctgggacgggcgtcagcaaccagctcatcgtcgaccctacccatgtg
tactccgacctcgacgagctcatcgtcaaccatgttcaggcgatggcacgccgggtcgat
gacctcatggcgcatgaacgcttcaagaagggccccgaggatgagcttcatctgtacctc
aaacagcagctggcagcaaacccaaagcgtagtatgtatgggttcacgctgaatcgcaaa
aagcctggacacttcaacctttgcttcttggcgagcaaagggtctaccgtgcagtcatgg
cccgttcgtgtcgcgccggaggcgtactatctctttgatgcagcagctgtcggtgtttcc
gagctttgcgatgctttcaaagtccgtcatctccacgaatcacaaaaccttgccaacggt
ggcaagacaccctaccctggtgctggtggtcgtaccccagcacgcggacacgcaacacca
ggacatatgacaagccgcggtcgcacacccaacccctacgcgggaggtgtaacacctcga
cctccaccccccggcggcgtcacgcccagacctccgccaccacccaatgccttccccggc
ggacctgctcctccacccaacgctttcggcgcgcctcctatgccgcctgctcccggcttc
aatggcgggtggggagcagtgccacctgcgccacctggtggtatggttccgccgggcatg
aatccccagcgtgctgctatgctccagcaagcaggcggtgcaggaggatggggtggaggc
agcggtggttggggtcaatga
DBGET
integrated database retrieval system
