Schizophyllum commune: SCHCO_02528027
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Entry
SCHCO_02528027 CDS
T01331
Symbol
SCHCODRAFT_02528027
Name
(RefSeq) putative rRNA pseudouridine synthase
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
scm
Schizophyllum commune
Pathway
scm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCHCO_02528027 (SCHCODRAFT_02528027)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02528027 (SCHCODRAFT_02528027)
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02528027 (SCHCODRAFT_02528027)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
SCHCO_02528027 (SCHCODRAFT_02528027)
Prokaryotic type
SCHCO_02528027 (SCHCODRAFT_02528027)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
SCHCO_02528027 (SCHCODRAFT_02528027)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
9594859
NCBI-ProteinID:
XP_003037567
UniProt:
D8PKN5
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSGLTKAQVASAQLEGDYKIKPENAQPKLDTSQWPLLLKNYDKLLVRSSHFTPIPAGCSP
LKRDITTYIKSGVINLDKPSNPSSHEVVAWLRRILRVEKTGHSGTLDPKVTGCLIVCIDR
ATRLVKSQQGAGKEYVCVLRLHNSLPDPAALPRALQTLTGALFQRPPLISAVKRQLRIRT
IYESKLFEFDEKRNLAVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAMSEND
EIVTMHDVLDAQWMYDNTRDESYLRRVIRPLECLLVGYKRIVVKDSAVNAVCYGAKLMIP
GLLRYEADINLNEEVVLMTTKGEAIAIGIAQMSTVELATCDHGVVAKVKRCIMERDTYPR
RWGLGPVALKKKKMVKEGQLGKHGEKLPGVTPQEWSKDYVDYNRDEQQPTASIQVVSETM
TAKVEVTETSKKEEKKRKRKSEVPEVDPDVTMATENGEDESEEAKAERKRKRKEEKAAKK
AAEAAGGEDDEAKREKKRLKKEKKARESLGGEA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggactcacaaaagcgcaagtcgcgtccgcgcagctcgagggcgactacaagatc
aagccagaaaatgcgcagcccaagctcgacacgtcgcagtggccgctcctcctcaaaaac
tacgacaagctgcttgtccgttcctctcatttcacccccatccccgctggctgtagcccc
ctgaagcgtgatattaccacgtatatcaaatctggcgtcataaacctcgacaagccatcg
aacccgtcctcgcacgaagtcgtcgcctggcttcgcaggatactacgcgtggagaagacg
ggtcacagtgggacgcttgacccgaaggtcactggatgcttgatcgtctgcattgaccgc
gctacgcgtcttgtaaaatcccagcagggtgcaggtaaggagtacgtttgcgtgcttcgc
ctgcacaacagcctccccgaccctgccgccctcccccgcgccctccagacccttactggt
gccctcttccaacgcccacccctcatctccgccgtcaagcgtcagctccgtatacgcaca
atttacgagtccaagctcttcgagttcgacgagaagcgcaatcttgccgtcttctgggtg
tcttgtgaggctggtacctacatccgtacgctatgcgtgcacttgggcttgctactcggt
gtcggcggccacatgcaggagcttcgccgtgtgcgcagtggtgctatgtccgagaacgat
gagatcgtgaccatgcatgatgtgctcgacgcgcaatggatgtacgacaacacgcgcgat
gagtcgtacctccgccgcgtaattcgccccctcgagtgccttctcgtaggctacaagcgc
atcgtcgtcaaggacagcgccgtcaacgccgtttgctacggcgcaaaactcatgatccct
ggtctcctccgctacgaggccgacatcaaccttaacgaggaggtcgtgctgatgacgacc
aagggcgaggccatcgcaattggcatcgcgcagatgtccactgtcgagctcgccacttgc
gaccacggtgtcgtcgccaaggtcaagcgctgcatcatggagcgcgacacctacccgcgc
cgctggggccttgggcccgtcgcgctcaagaagaagaagatggtcaaggagggccagctc
ggcaagcacggcgagaagcttccaggtgtcaccccgcaggagtggtcgaaggactacgtc
gactacaaccgcgacgagcagcagccgacggcgtctatccaggtcgtctcggagacgatg
acggcgaaggtggaggtgactgagacctccaagaaggaggagaagaagcgcaagcgcaag
tcggaggtgcccgaggtggaccccgacgtgacgatggcgacggagaacggggaggacgag
agcgaggaggcgaaggcggagcgcaagcggaaacgcaaggaggagaaggctgcgaagaag
gcggcggaggcggccggcggtgaggatgatgaggcgaagcgggagaagaagcggttaaag
aaggagaagaaggcaagggagtcattagggggagaggcatga
DBGET
integrated database retrieval system
