Schizophyllum commune: SCHCO_02557766
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Entry
SCHCO_02557766 CDS
T01331
Symbol
SCHCODRAFT_02557766
Name
(RefSeq) Nrap protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
scm
Schizophyllum commune
Pathway
scm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCHCO_02557766 (SCHCODRAFT_02557766)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02557766 (SCHCODRAFT_02557766)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SCHCO_02557766 (SCHCODRAFT_02557766)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Nrap_D5
Motif
Other DBs
NCBI-GeneID:
9592962
NCBI-ProteinID:
XP_050197155
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MATNLKRKRAPEKASRKTRKVSPEEEEVTSGQSADEQAFKDLEDDVPFEDLEADGAPNDE
AEGEDSDGDQPMTPPPQDVHHHTGGSKKLPAGAELRQIKDAADLYQSSSFKLQIDALLPN
VSPKASRIPPLEKFLFALHAALQKIPSKSPTHPLRAAEPLKKHDVVVPYSLPLPTEETNW
KVAFEKPSNITIVGSWGNKLSVKGKDKAPFRVDVAVEMPDSLFQEKDYLNGRFFHKRAFY
IATIAAAIKKDKSLNVDVFYHSPNDDPRLTSVVLTHRNDGSETDFTKLNAEVNILPVLSP
TCPISLRHLSPSHANIRISSSTSDPSSSQTHEPTPLYNTALLTATAPRPELLAAHTLRQQ
SAAFADALTLLRVWANQRGFGVGSRMCVRGFEGKGPFWAGVLALLVYGEEGAGAGSKKRK
PLGRGLSSWQMFRAALDFLAKHDFEREPVFVKAAQPRELNAEEYAENFSATFVSSATAVN
LLADVPLGSLALLRHEARTTLDTLGSDDSFDEVFLKEKRDLGTRFDMVLQADISSAKHSK
ASTSDILDKGTLSNACLAAISSLLQQALGNRCKAIAILHPSSTSRPLTSALPTTPSTIHI
GLLHDPEHAFRLVDHGPPADDPNPAHSATFRALWGPKAELRRFKDGRITESVVWDVKTSD
ERAHVPALIVQHILQTHFGIPKSAVRTWQSEFDAVLRLPAEVAQAYAAAGVRAGFQSAIE
AFDGLVRQLKSMDEVLPLAVLNVSAAAPQLRYTSALAPAPLPSKLMSSLPAGATHLAPIE
AILEFEKSARWPADLKAVQKIKLAFCERIADALMGAVPGLTARVVVADGVTRSRVVDQAR
LEIVTPEGWAFWVRIWYDREVVLLDRVAEDQSRLPHVTRGGPTVSGKEKQEALEAKEVWV
RRFLHGPAHHRAMLALSHRYGALSGTVRLVKRWLASHMVLGGHVSEEAVELLCASVFVGR
GKTRAAEETRTGVPASRERGLAAVVAFLKDWKWEEGLEVPLYESDTALMSAARVSKEGVW
RISTQGDREGWIWTSSGPDRVVAHRIREIAKATWNHLQLLETEAFSVKPMFTHPLAGYDF
LIHLKKAHLPRYLLNVAYPEAQGRHKEKTVRPGFDPAELFFADLQRVYGDTMKLFHDPYG
GDVIAGVWDPSLKESRPFRVRAGYSTVPQDKTSSGKSKGKDTVVLNTTAVLSEIERLGRG
LVESILVQQ
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacttgaagcgcaaacgcgccccagaaaaggcgtctcgcaagacgcgcaaa
gtgtccccggaggaagaggaggtaacaagcgggcaatcggcagatgagcaggcattcaaa
gatctggaagacgatgttccctttgaagacctcgaggccgatggcgcgccaaatgatgaa
gctgaaggggaggacagcgacggtgaccagcccatgacaccgcccccacaagacgtacac
caccacaccggagggtcgaagaagctccccgcgggcgccgagctgcgacagatcaaggac
gccgccgacctttaccagtccagctccttcaagcttcagatcgacgcgctcctgccgaat
gtgagccccaaagcgagccggatcccccctctcgagaagttcctcttcgcgctgcatgcg
gctctgcagaaaataccgtcgaagtcgcctactcatcccctacgtgctgctgagccattg
aagaagcatgatgtcgtggtgccgtactccttgcctttgccgacggaggagacgaattgg
aaggttgcattcgagaaaccgagcaatatcacgatcgttgggagctggggaaacaagctg
tcggtaaaggggaaggacaaggcgcccttccgtgtcgatgtcgcagtcgagatgccagac
agtctcttccaagagaaggattacctcaacggccgtttcttccacaaaagggccttctac
atcgcgaccatcgcggccgcgatcaagaaggacaagtcattgaacgtcgacgtgttctac
cactcgccgaatgatgacccacggcttacctcggtcgtcctgacccatcgcaatgatggc
tccgaaaccgacttcacgaaactcaacgccgaagtaaacatcctccccgtcctctccccc
acctgccccatctccctccgccatctctccccctcgcacgccaacatccgcatatcctcc
tccacctccgacccctcatcctcccaaacccacgaacccacccccctctacaacaccgct
ctcctcaccgccaccgccccacgccccgagcttctcgccgctcacacgctcaggcagcag
tctgctgccttcgccgacgcgctcaccctcctccgcgtctgggcaaaccagcgcggcttt
ggcgtcgggtcccgcatgtgcgttcgaggcttcgagggcaagggcccgttctgggccggc
gttctggcgctcttggtatatggcgaggagggcgcaggtgctgggagcaagaagaggaaa
ccgttgggcaggggcctgagctcgtggcaaatgtttagggcagcgctggactttttggcg
aagcatgacttcgagcgtgagccggtgttcgtcaaggccgcgcagccgcgggagctcaat
gccgaggagtacgcagagaacttcagcgcgacttttgtgagctctgcgacggctgtcaac
ctactcgcggatgttcctcttggttctttggctttgcttcgccacgaggcgcgtacgacc
ctggacacattgggatccgacgactccttcgacgaagtcttcctgaaagagaagcgcgac
ttgggcactagattcgacatggtcttgcaggccgacatctcgtccgccaagcacagtaaa
gcctccactagcgacatcctcgacaagggcaccctttcgaacgcctgtctggccgctatc
tcctccctcctacaacaagccctcggcaaccgctgcaaagccatcgccatcctccatccc
tcctctacctcccgtcccttaacctccgccctccccacaaccccctctaccatccacatc
ggcctccttcacgaccccgaacacgccttccgccttgtcgaccacggcccgcccgccgac
gaccccaaccccgcccactccgccaccttccgcgccctctggggccccaaggccgagctc
cggcgcttcaaggacggccggatcaccgagtccgtcgtctgggacgtgaagacgagcgac
gagcgcgcacacgtgcccgcgcttatcgtgcagcatatcctccagacgcactttgggatc
ccgaagagcgcggtgcggacgtggcagagcgagtttgacgcggtgctgaggctgcccgcg
gaggtggcgcaggcgtatgcggcggcgggggtgagggcggggttccagagtgcgatcgag
gcctttgatgggttggtcaggcagctgaagagcatggacgaagtgcttccgctcgctgtg
ctcaacgtcagcgccgccgcgccgcagctgcggtataccagtgcgcttgcacctgcacct
ttacccagcaagctgatgtcctccttacccgctggcgcgacgcaccttgcgcccattgag
gccattctcgagttcgagaagtccgcccgctggcccgccgacctcaaggccgtccagaag
atcaagctggccttctgcgagcggatcgcggacgcgctcatgggtgccgtcccgggcttg
accgctcgcgtcgttgttgctgacggcgtcacgcgctcgcgagtggtcgaccaggcgcgc
ttggagatcgtcacgcccgaaggctgggcgttctgggtgcgcatctggtacgaccgcgag
gtcgtcctcctggaccgcgtcgccgaggaccagtcgcgcctgccgcacgtcacgcggggc
ggccccactgtcagcgggaaggagaagcaggaggcgctcgaggcgaaggaggtgtgggtg
cgccgcttcttgcacgggccagcgcaccatcgtgcgatgttggcgctgagccatcggtat
ggggctctttctggcaccgtgcggttggtgaagcgctggctggcctcgcatatggtgctc
gggggccatgtgagcgaggaggccgttgagcttctgtgcgcgagcgtttttgtgggccgc
gggaagacgagggcggcggaggagacccgcacaggtgtaccagcgagtcgagaacgtggc
ttagcggccgtcgtagccttcttgaaggactggaagtgggaggaggggctggaggtgccg
ctgtatgagagcgatacggcgctaatgtcggccgcgcgcgtgtcgaaggagggtgtctgg
cgaatatcgacgcagggcgaccgggaggggtggatatggacgtcgagtgggcccgaccgc
gtcgtcgcgcaccgcatacgcgagatcgcgaaggcgacgtggaaccatctgcagctcctc
gagaccgaggcgttcagtgtcaagcccatgttcacgcaccccctcgccggctacgacttc
ctcatccatctgaagaaggctcacttaccccgatacctccttaacgtcgcctacccggaa
gcgcaaggccgtcacaaggagaagaccgtgcgcccagggttcgacccagcagagctcttc
ttcgcagaccttcagcgcgtttacggcgacacgatgaagctgttccacgacccatacggc
ggcgacgttatcgcgggcgtgtgggatccctcgctgaaggagtcgcgtcctttccgcgtg
cgggctggttactcgactgtgccgcaggacaagacgtcctctggcaaatcgaagggaaaa
gataccgtggtcctgaacactacagctgtactgtccgagatcgagagattggggcggggt
cttgtcgagagcatacttgtacagcaatga
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