KEGG   Schizophyllum commune: SCHCO_02560531
Entry
SCHCO_02560531    CDS       T01331                                 
Symbol
SCHCODRAFT_02560531
Name
(RefSeq) WD40 repeat-like protein
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
scm  Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:scm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scm04131]
    SCHCO_02560531 (SCHCODRAFT_02560531)
Membrane trafficking [BR:scm04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    SCHCO_02560531 (SCHCODRAFT_02560531)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 EIF3I WD40 Beta-prop_EIPR1 zf-RING_16 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_SCAP Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd DUF7571 Beta-prop_DCAF12 PHD
Other DBs
NCBI-GeneID: 9597175
NCBI-ProteinID: XP_050202724
LinkDB
Position
Unknown
AA seq 940 aa
MDWYSDARMHSAGPSKYVRLPRVAPPGGGAIAISEDGRRSVVAGKESLRIVRVSAPDQMP
TTEHKFAVGPGGYRVDASRNMWDGSGLKMDSASTDVSWAKGPFDHKILTSARNGELIMWD
LNKSGPTKYERRAKDHARSIHQLAVSAVVHHYAITGSADADLRVWDLRDMRKSIMRIKHP
AAVRALAFSPSNTTPLQALTGLDSGALHRWDLRVGQRGQLDRSPVAHAGPVTDVDWVSGW
AASAGLDATVRVWDVASLRNTYTLRPARAPRRAIWRPGSETELALMPAEPAETDTVDIWD
VRRGWIAKWAIPGTALDGGVAGIAFGGTDALWAQHTSGAFVQYDLRDCTRPLDTIPRVAA
AWEPAGSLALVTDRPDPWEVPYDDVSPERQVLRPKTIGDPPFRPRTQTVATCVPTSQNDD
LDVFVALARDYLFEGADKQLLCVHNAQAAIRMGKLDVGQTWLLLGSTLKDVIPQEEETTT
PEPSKPKHPSPPLVHSMSAPATIPSYRFPGHDLSEIPSRSPSRQSTQSPQSGRSPAVTRR
PSAFRRPSMAVSSPGDKSFPHVGEGALDDSDESSSGGELPVRPAHASSIHAPANDDSDSP
SPASTDSESHPVSVVRRRSRSAAISRSRGRSRSGTLARGGPPRLTRQESNTSVRTVIAED
AQNHHPTRPPLQQEETLRDIRALKEEEKARRRKLEESAARTERRPEVVAEDEERLRNLAW
TALKGALELFAEQGDVQTCAMLVLVAGAELRVGPRRISRFVDAYLDILSRLQLHTSAAYV
RKFCAVDDAKKESTMETTIYTACMKCKRAIIAPPAAARGAFAYCPSCRAFFLCAICRLPV
RGLLFHCALCGHGGHQACYREYYLPRPMVEMPNATLPESRGRSLTRPDADAATDTTTDAG
APTSVGNRNATTTQVLAGHPCATGCGHFCWAAGAVVDVAA
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggactggtactcagatgcgcggatgcactccgcaggtccatccaagtatgtcaggctg
ccgcgagtcgcccctccaggcggcggcgcgattgcgatcagcgaggatgggcggcgctca
gtcgtcgcggggaaggaatccctacgcatcgtccgcgtatccgcacccgaccaaatgccg
accacagagcacaagttcgccgtagggcccggcggctaccgcgtcgacgcctcgcgcaat
atgtgggacggcagcgggctcaagatggacagcgcgagcacggacgtgagctgggcaaag
ggccccttcgaccacaagatcctcactagcgcgcggaacggcgagctcatcatgtgggac
ctcaacaagagcgggccgacaaagtacgagcgccgcgcgaaggaccatgcacgatctatc
caccagcttgcggtgtcggctgtagtacaccattatgcgataacgggctctgcggacgct
gacctgcgcgtctgggacctgcgcgatatgcggaagtctatcatgcgtattaagcatcca
gctgctgtgcgcgctctcgcgttctccccgtcgaacacaacccctcttcaagctcttacc
ggtctcgatagcggcgctctccaccgttgggatctgcgcgttggccagcgtggtcaactc
gatcgttccccggtcgcccacgccggccccgtcacggatgttgattgggttagtggatgg
gctgcctccgccggcctcgacgcgactgttcgcgtctgggacgtcgcctccctccgcaat
acctacacccttcgacccgcccgcgctccacgtcgcgcgatctggcgccccggctccgag
accgaactcgccctcatgcccgccgagccagcagaaaccgacaccgttgacatatgggac
gtccgccgcggctggatagcgaagtgggccatccctgggaccgccctcgacggcggcgtc
gccggcatcgcgttcggcgggacagacgcgctatgggcgcagcatacgtccggcgcgttc
gtgcagtatgacctgcgcgactgtacgcgtccgcttgataccatacctagagtggcggcg
gcttgggagcctgctggctcgctggcgttggtaactgaccgtccagatccgtgggaggtg
ccttatgacgatgtctcgccagaaaggcaggttctacgaccgaagacaatcggcgatcct
cccttccgcccgaggacccagactgttgcgacatgcgtgccaacatctcagaacgatgat
ttggatgtatttgttgccctcgctcgcgactatctctttgaaggcgccgacaagcaatta
ttgtgcgtccacaacgcccaggcggctatccgaatgggcaagttggatgtggggcaaaca
tggcttctactggggtcgactctcaaggatgtaatacctcaggaagaggaaacgacgacg
cctgaaccgtccaagcctaaacaccccagtccaccactcgtgcactctatgtcggctcct
gcgaccatccccagctaccgctttcctggtcatgacctctcggagataccgtcacgaagt
ccctctcgccagtccacacagtcgccgcagtccggacgctctcccgccgtcacgcgtcgt
ccttccgccttccgcaggccgtcgatggccgtatcgagtcctggggacaaaagctttcct
catgtcggcgagggcgcgttggacgactccgacgaatcttcgtctggcggagaattaccc
gtacggcctgctcatgcaagtagcattcacgcgcctgcaaacgatgacagcgattcaccc
tcgcctgcctccaccgattccgaatcccatcccgtttccgtagttcgccgacgcagccgc
agcgcagcgatctcgcgcagtcgagggcgaagtcgtagcgggacgcttgcccgcggtggg
ccgccacgactcacccgccaggagtccaataccagcgtgcgcactgtaattgcagaggat
gcgcagaatcaccatcccacgcgacccccgctgcagcaggaagagacgttgcgcgatatt
cgggcgttgaaggaagaggaaaaggcaagaaggcgaaagttggaagaatctgcggcgagg
acggagcggagaccggaagttgttgccgaggacgaggagcggctgcggaatctggcctgg
acagctttgaagggtgcacttgagctgttcgcggagcagggggatgtgcagacatgcgcg
atgctcgtgctagtcgcgggtgcggaactccgcgttggccctcgtcgaatatcccgcttt
gtcgacgcgtaccttgacatcctttcgcgactgcaactccatacctctgctgcctacgta
cgcaagttttgcgccgtggacgatgcaaagaaggagagcaccatggaaacaacgatctat
accgcgtgcatgaagtgcaagcgtgctatcattgcgcctcctgcagctgcccgtggcgcc
ttcgcttactgcccttcttgcagggccttctttttgtgtgctatctgccgccttcccgtc
cgcggcctactctttcactgcgcgctatgcggccacggcggtcaccaggcatgctatcgc
gaatactatctccctcgaccgatggttgagatgccgaacgcaacgctgccggaaagccgt
ggtcgttcattgacgaggccggatgcagacgcggcgacagacacaacaacggatgctggt
gctccaacaagcgtaggcaatcgcaacgcaacgacaacccaggttctagcgggccatccc
tgtgcgacgggttgcggccatttttgttgggcggcgggggctgttgtggatgttgcggca
tga

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