Schizophyllum commune: SCHCO_02571293
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Entry
SCHCO_02571293 CDS
T01331
Symbol
SCHCODRAFT_02571293
Name
(RefSeq) DEAD-domain-containing protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02571293 (SCHCODRAFT_02571293)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02571293 (SCHCODRAFT_02571293)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCHCO_02571293 (SCHCODRAFT_02571293)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
9590278
NCBI-ProteinID:
XP_050200911
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSDERLVDTQTTFASFANILDQRVLRALADLGFARPTLVQAKAIPLALESRDILARARTG
SGKTAAYCVPLVQKILNLNAKSVGTSRRAEAPATRALILVPTRELAEQVNGHLRKLLAYC
EGEVSVINVASGNTAGLQRTLISDTHHIVIATPSRALAFLQSKALSLSALDSLVIDEADL
ILSYGHDEDVRGIFNGGYLPKVYQSFLMSATMTEDVEMLKGLALRNPAILKLEEDPAAAN
LTQYAVRCTQRDKFLLTYVILKLKLIHGKCIIFVNDVDRCYRLKLFLEQFSIKSCVLNSE
LPLNSRYHTVQEFNKGVYDYIIATDESGLGERDEEDIERETEAEAAGEEEAESSEDEAVE
NGDEAAEDAEEDDGFTSAQRTTSPAPKKRKRAATPPPASRKKAKPDPPSASSAASPPTKA
KRPRASDREYGVTRGVDFLDVAAVLNFDLPGSARAYTHRVGRTARAGRAGMALSFVSRPD
LSDKDPVNRTLGRRDEEVFARIEREQGAGAVKEYRFDMRQVEAFRYRMEDALRSVTRVAV
REARVRELKAEVLGSEKLKAHFEDNPLDLEFLKHDRALHPQRVQPHMKFVPKYLIPGGVA
AETAQATGEGSKGPGDVGFVPFKKDNGRGRGRGRGGGGRGGRGGRGGGAGKRKSDPLRKF
GR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaacgactagtcgacacgcagacgacgtttgcgtcgtttgcgaatatcctc
gatcagcgcgtcctccgcgcgcttgccgatcttgggttcgcccgcccgacgctcgtgcag
gcgaaggcgattcccctcgcgctggagagccgcgatatactcgctcgggcgcgcacgggg
agcgggaagaccgccgcgtactgcgtaccactggtgcagaagatcctcaacctgaacgcc
aaaagtgtaggtacgtctcgccgggcggaagcaccggcgacgcgcgcgctgatcctggtg
ccgacaagggagcttgccgagcaggtgaatgggcacctgaggaagctgttggcgtattgc
gagggcgaggtgtcggtgatcaatgttgcgtcggggaatacggcggggttgcagaggacc
ctcatctccgacacccaccacatcgtgattgcgacgccctcgcgtgcgctcgccttcctc
cagtccaaagccctctccctctctgccctcgactccctcgtgatcgacgaggccgatctt
atcctttcgtacggccacgatgaagacgtgcgcgggatcttcaacggcggctacctcccg
aaggtctaccagtccttcctcatgagcgcgaccatgaccgaggacgtcgagatgctcaag
gggctcgcgctgaggaacccggccatcctcaaactcgaagaagaccccgcagcggcgaac
ctcacccaatacgccgtccgctgcacccagcgggacaagttcctcctcacctacgtgatc
ctcaagctgaagctcatccacgggaagtgcatcatcttcgtaaacgatgtggatcggtgt
tatcggttgaagctctttctggagcagttctcgatcaagagctgcgtgctgaatagcgag
ctgccgttgaacagtcggtatcacaccgtgcaagagttcaataagggcgtgtacgactac
atcatcgcgacggacgagagcggtttgggcgagcgggacgaggaagatatcgagcgcgag
acggaggcagaggcagccggtgaagaggaggcagaatcgagcgaagacgaagccgtggag
aacggcgacgaagcggccgaggacgccgaggaagacgatggcttcacctccgcccaacgc
accacctcccccgcccccaagaagcgcaagcgcgccgcgaccccgccaccggcctcgcgc
aaaaaggccaagcccgaccccccttccgcctcctctgccgcctcgcccccgaccaaggcc
aaaagaccccgcgcctccgaccgcgagtacggcgtcacccggggcgtcgacttcctcgac
gtcgccgccgtgctcaacttcgacctccccggctccgcgcgcgcgtacacgcaccgcgtc
gggcgcaccgcgcgggccgggcgggcggggatggcgctgtcgttcgtgtcgaggcccgat
ctgagtgacaaggacccggtgaaccggacgctggggcggcgggacgaggaggtgttcgcg
cggatcgagcgcgagcagggcgcgggagcggtgaaggagtacaggttcgacatgcggcag
gtggaggcgtttaggtatcggatggaggatgcgctgcggagcgtgacgcgcgtggcggtg
agagaggcgagggtgcgggagctgaaggcggaggtgttggggagcgagaagttgaaggcg
cattttgaggacaacccactcgacctcgaattcctcaagcacgaccgcgcgctgcatccg
cagcgcgtgcagccgcatatgaagtttgtgccaaagtacttgatacctggcggtgttgct
gcagaaaccgcgcaagccaccggagagggcagcaagggccctggagacgtcggctttgta
cccttcaagaaggacaacggcaggggacgtggccgcgggcggggcgggggaggcagagga
gggcgtgggggccgcggtggaggcgcgggcaaacgcaagtcggatccgttgaggaagttt
gggcggtga
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