Schizophyllum commune: SCHCO_02577396
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Entry
SCHCO_02577396 CDS
T01331
Symbol
SCHCODRAFT_02577396
Name
(RefSeq) uncharacterized protein
KO
K14303
nuclear pore complex protein Nup160
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02577396 (SCHCODRAFT_02577396)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02577396 (SCHCODRAFT_02577396)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02577396 (SCHCODRAFT_02577396)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02577396 (SCHCODRAFT_02577396)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SCHCO_02577396 (SCHCODRAFT_02577396)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
HEAT_Nup120
TPR_NUP160_120_M
TPR_Nup160_C
Motif
Other DBs
NCBI-GeneID:
9589483
NCBI-ProteinID:
XP_050200782
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MDDHFLVSASFSSLFSLEGDVIEVPTVRPADINNEPRRNNDLPNEHASLSLVNDKRVAGP
VVLRVLNGGELIELATLKHNLVPLRFHFPSPVLPSPTFFYPSVDELHILAVTTIGSLYRI
VITVYQDVHSGEFQWGELKTINEYPIGHGSGKLSGVAHARDPSCVVVGLDNGSLLRLDSM
SMYAVGDEQWTESVSSDSGLRAKLSSLVYSSHAEGDKIISIATMPAWQSEDGLWDSTSDI
LPIWTLSRDRTLRMWKPHAGVSSIKVDASSTPSREVTPVPGVAQSQTHQVLLDAEPQTLV
RVFKPVEHKDNICVIVFIPSPASPTSGGCFHVYEMRKTSFVLCGTIPCTVQTVGYHLQDF
SVARDKLYALWDDHGRSIVQQMHINFEEAPNLSTTWRTFTYASQRELTPAYLDELLMGRP
AVADTFLEALLSPGVFSSLTLKLAIEQYAADCRSLPGPMPQQLRESYANVAENIAAVVGC
TVTLNRDPQTGLPMYDNYNVALKRDWEGFIARCREIERSARWPSCLGRSGDDILVVERER
AGVAVRPDEAITVREAVEHGGVSQTYSILSVFWQLKSRLSPASLVAIENNVLRVLQSDKN
FHLSGMVENQADVEQIISDDVQDEGLNAWMEGQLLKVGDLSHALAAAVELLVGGTVKGED
YEDDTIPAPLPEWQRELIAAFTAASIEARYSLCLAIFIYVYFCAEQKLLSTWEEPIIEEL
FGVFRGLVVLRFLSRQPAKPTPPAVGPAYRAPRPQPEFALLHRLVAESVRAAGDVELLDM
VRAFIDTTGLLRSASPADVSSHEIDLCFRLRRLGATSVAHEVTLYFPLTHAMAYIRARLY
LDCHRPDDAADMLMKVAGCLGPDSGSSPSEREGLAKLLPDGPLTSEYAFAVHCSQLFKAS
NYVFHQVRFAQQALSLATDEDEMLILWEAIIKGNTALGYYEEAVAALIAAPDKLSKQELV
TGLVYHICESGAIPKLVSLDLSPFQADVEEALSFKARNVDPRVRPHYSKVLYTWFMSRGN
YGEAALTMYQRARKLAAVIVDPVSFANHVVEQLDAYLVAINALSLSDQQEPFIACPTVDH
PRKKRRTSKYIPEERFKTDKLATNYGVDVIRLSDLEYEYALLNAQADLIRRDPAILQTQE
FLLPPESIVLRLSSSNRFDAALTTARSLQVDMTDTFSRLTTQCLRLARGSVDVMLSDADW
LLTDAVASWAGTPAEKGWRFLRDALARYDGRATDWRYTKAVYESIMSVGAQPPPWLVQVL
EDNQHEYLVRASLKFDKLPDAVRHAVALVKKVSDTLTRGEPPRHASAAWLPYALIDQVLV
AAESFDAPVIAQVGELRGAVAGHAERMEKVGKRMVVV
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccacttcctcgtttccgcttccttctcttctcttttctccctcgaaggggat
gtcatcgaggtccctaccgttcggccagcggacatcaacaatgaacccaggaggaataac
gacctgccgaacgaacacgcgtctttatcgctcgtaaacgataagagggtagcggggcca
gtcgtgctacgcgtgctgaatggcggagaactcatcgagctcgcgacactcaagcacaac
cttgttcccctccgattccacttccccagcccggtcctaccttccccaaccttcttctac
cctagtgtggacgagctgcacattctcgctgtgacgacaatagggtcactgtaccggatt
gtaatcacggtgtatcaggatgtgcactcgggcgaattccagtggggagaactcaagacg
atcaacgagtatccgatcgggcatggcagcggcaagctctcgggtgtcgcgcacgcgagg
gatccttcgtgtgtggtagtcgggctggacaatggctctttattgagactggactctatg
tcaatgtatgcggtcggagatgagcaatggaccgagtctgtttccagtgactccgggttg
cgcgcgaaactatcctccctcgtctactcgagccacgctgaaggggacaagatcatttcc
attgccacaatgccggcctggcagtcggaggatggtctatgggactcaacttctgatatc
ctacctatatggactctttctcgcgaccgcaccctccgtatgtggaagccccacgctggc
gtgtcatccatcaaggttgacgcctcatccacccccagccgcgaagtcactcccgtcccc
ggcgtcgcacaaagtcaaacccatcaagtcctcctggacgccgaaccgcagaccctggtc
cgtgtcttcaaacccgttgaacacaaagacaacatctgcgtcatcgtcttcatcccctcg
cccgcgtcgccaacctctggtggctgcttccacgtctacgagatgcgcaagacgagcttc
gtgctctgtggcactatcccctgcaccgtacagaccgtcgggtaccacctgcaggacttc
tcggtcgcgcgggacaagctatatgcgctttgggacgatcacggccggtctatcgtgcag
cagatgcacatcaattttgaggaggccccaaatctatctacgacgtggcgcacattcacg
tacgcgtcgcaaagggagctaacccccgcataccttgacgagctcctaatggggcgcccg
gccgtcgcggacacgtttttggaagcgctgctgagcccgggcgtcttctcgtcgctcacg
ctcaagttggcgattgagcagtatgcggcggactgccgctctctgcccggcccaatgcca
cagcagctgcgggaatcctacgccaacgtcgccgagaatatcgcggctgttgtggggtgc
actgtcacactcaatcgtgacccgcaaacgggcctgccgatgtacgacaactacaatgtt
gcgctgaagcgcgactgggagggcttcattgcgcgctgccgggagatcgagcgcagtgcg
cggtggccgagctgcctcggtcgctctggtgacgatatcctcgtcgtggagcgggagcgt
gccggcgtcgctgtgagacctgacgaggccatcactgtacgcgaggctgtcgagcacggc
ggcgtgtcgcagacctactccatcctctctgtcttctggcagctcaagtcgcgattgagc
cccgcgtcgctggtcgccatcgagaataacgtgcttcgcgtactccagtccgacaagaac
ttccacttgtcgggcatggtcgagaaccaagccgacgtcgagcagatcatcagcgacgac
gtccaggacgagggactcaacgcctggatggaaggccagctcttgaaagtcggcgacctc
agccacgccctcgccgccgccgtcgagctcctcgtcggcggcaccgtcaaaggcgaggac
tacgaggacgacacgatccccgcccctctccccgaatggcagcgcgagctcatcgccgcg
ttcaccgccgcctccatcgaagcccgctactcgctctgcctcgcgatcttcatctacgtc
tacttctgcgcggagcagaagctgctcagcacgtgggaggagcccatcattgaggagctc
ttcggcgtgtttcgcgggctcgtcgtgctgcgcttcctctcacggcagcccgcgaaaccg
acgccgcccgcggtgggcccggcataccgcgccccgcgcccgcagcccgagtttgcgctg
ctgcacaggctggtggcagagtcggtgagggcggcgggggatgtggagctgttggatatg
gtgcgcgcgttcatcgacacgacgggcttgttgcgttcggcgtcgccagcggatgtgagc
tcgcatgagatcgacctttgcttcaggctgaggcggctgggcgcgacgtcggtggctcat
gaggtgacgctgtacttcccattgacgcatgcgatggcgtacattcgcgcgaggctatat
cttgactgccaccgtccggacgacgctgcggacatgctgatgaaagtggcgggatgcttg
ggtcccgacagcggctcgtccccatcagaacgggagggcctggcgaaactcctaccggat
ggacccttgacctctgaatatgccttcgccgtacactgttcgcagctcttcaaggcgtcg
aactatgtcttccaccaggtccgcttcgcgcagcaagcgctatcgcttgcgaccgacgag
gacgagatgcttatactctgggaggccatcatcaagggcaacacggcgctggggtactac
gaggaggcggtcgccgccttgatcgctgccccggacaagctatcaaagcaagaactcgtc
acgggcttagtatatcacatttgcgagtctggcgccatcccgaagctcgtgtctctcgac
ttgtcgcccttccaggcggacgtggaggaggcgctgtcgttcaaagcgcggaacgtcgac
cctcgcgtgcgtccgcactattcaaaggtgttgtacacctggttcatgtcgagagggaat
tacggagaagctgcattgactatgtatcagcgcgcgcgcaagctcgctgcggtcattgtc
gacccggtttccttcgcgaaccacgtcgtggagcagctggacgcgtacttggttgcaatc
aacgcgctttcgctatccgaccagcaagagcctttcatcgcatgccctaccgttgatcac
cctcgcaaaaagcggcgaacgtcgaagtacattcctgaggaacgcttcaaaacggacaag
ttggccaccaactatggcgtggatgtcatccgcttgagcgacctcgagtatgagtacgcc
ctcctcaacgcccaggcagatctcatccgccgagatcctgcgatcctccaaacgcaagaa
ttcctcctgccgccagaatccatcgtcctccgtctctcctcctccaaccgcttcgacgcc
gccctcaccaccgcgcgcagcctccaagtagacatgaccgacaccttctcccgcctcacg
acgcagtgcctccgcctcgcccgcggtagcgtcgacgtcatgctctccgacgccgactgg
ctcctcactgatgccgtcgcgtcttgggcgggcacccccgcggagaagggctggcgcttc
ctgagggatgcgctagcgcggtacgatgggcgggcaacggactggcggtataccaaggcg
gtgtatgagagtattatgtcggttggagcgcagccgccgccgtggctggtacaggtgctg
gaggacaatcagcatgaatatctggtgagggcgagcttgaagttcgacaaactgccggac
gcggtcaggcatgcggtcgcacttgtgaagaaggtctcggacaccctcacccgcggggag
cccccacgacacgcctccgccgcttggctcccatacgcgctgatcgaccaggtgcttgtt
gcggccgagtcgttcgatgcgcccgtgatcgcacaagtgggagaactgagaggcgcagtt
gcagggcacgcagaaaggatggagaaagttggaaagaggatggtagtggtgtag
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