Schizophyllum commune: SCHCO_02580925
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Entry
SCHCO_02580925 CDS
T01331
Symbol
SCHCODRAFT_02580925
Name
(RefSeq) DEAD-domain-containing protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02580925 (SCHCODRAFT_02580925)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02580925 (SCHCODRAFT_02580925)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
90S particles
Helicases
SCHCO_02580925 (SCHCODRAFT_02580925)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
9587592
NCBI-ProteinID:
XP_050199608
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MAAAGPSDPRKRKSRNAKDKPEPAKARKETEKQMIANLDRQAMEYDPPDDLKLFSDLPIS
QATKRGLKKAAFINMTDVQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEILYRRKWG
PADGLGALIISPTRELAVQIFEVLRSIGPFHSFSAGLVIGGKNLKDERDRLVRMNILVAT
PGRLLQHMDQTYGFECDNLQVLVLDEADRILDMGFAKTLSALLGHLPKSRQTLLFSATQT
DSVSDLARLSLTDPAFIATKEAEESHTATTPKNLEQHYAICTLDQKLDLLWSFIKTHLQS
KTLVFLSSCKQVRFVYETFCKMQPGVSLLHLHGKQKQMTRLAMYDRFTKMSHVVLFATDI
AARGLDFPAVDWVLQLDAPEDVETYIHRVGRTARYESKGKGLLFLMPSEEEGMLAAFAKR
DIDIKKIKIRPSKTQNIENQLQKLAFQEPEIKYLGQRAFVSYLRSVYLHKDKSIFKVDQL
PVDRYAESLGLPGTPKIKFLSKELAKQKKNASRAVAAAKSSAEANSSEEDSDAEDADVHS
SSDEEAEDEAESSSKPKRKPGEVRTKYDRMFERKNQDILSSHYSKMVERDDDGSGSEDDF
ITLARADHDLPDPDDSLPKTFAQAKQENLSAKKKAKMSRTGRAVVENGLGRKLVFDDEGR
EHELYELANGEEWFKEKGGLEGAIREGAKFAEGERERMQKTDVVDREEAKEKKRERKRKR
KEREREMMAAEGLAVVAPAEDAGYVSPDFDLPSGDEDEGEVAPPPPPAKRRKAVAERDEL
EDDEALALQLLRSRR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctggtccctctgaccctcgtaaacgaaagtcgcgcaatgcgaaggacaaa
cccgagcctgctaaggcgcgcaaggaaacagagaagcagatgatcgcgaacctcgacagg
caggcgatggaatatgaccctccagatgacttgaaattgttctcggacttgcctatctca
caagcgacgaaacgaggactgaagaaggcagcatttatcaacatgaccgatgtacaagcc
aagagtcttcctgtatctctgaaggggaaggacgtgttgggcgctgcacggacaggaagc
gggaaaacgctagcgttcctcatacctgtgctagagattttgtatcggcgaaaatggggt
cccgcagatggtctgggagcgctcatcatctcacccacgcgtgaactggcggtccagata
ttcgaagtcctccgttccataggccccttccactccttctctgccggtctcgtcatcgga
gggaagaacctcaaggacgagcgtgaccgactggtgcgcatgaacatcctcgtcgcgact
cccggccgcttgcttcagcacatggaccaaacctacggcttcgagtgcgacaatctccag
gtcctcgtcctcgatgaagccgatcgcatcctcgacatgggatttgcgaagaccctctcc
gcgctcctcgggcatctccccaaatctcggcaaaccctcctcttctccgctacccagacc
gactccgtctccgacctcgcacgcctcagtctcaccgaccccgccttcatcgccactaag
gaggccgaggagtcccacaccgccacgacgcccaagaacctcgagcagcactatgccatt
tgcactctcgaccagaagctcgacctgctgtggtcctttatcaagacgcacctccagagc
aagaccctcgtcttcctctccagctgcaagcaggtccgcttcgtctacgagaccttctgc
aagatgcagcccggcgtctcgctgctgcacctgcacgggaagcagaagcagatgacgcgg
ctggcgatgtacgaccggttcacgaagatgtcgcacgtcgtgctgtttgcaacggatatc
gccgcccgagggctcgactttcccgcggtggactgggtgctgcagctggacgctccggag
gatgtggagacgtacatccatcgcgtagggaggacagcgcggtacgagagcaaggggaag
ggtctgctgtttctgatgccgagcgaggaggagggtatgttggctgcttttgcgaagcgg
gatatcgacatcaagaagatcaagatccgccccagcaagacgcagaatattgagaaccag
ctacagaagctcgcattccaggagccggaaataaagtatctcggccagagggcatttgtg
tcgtatctgcgttccgtttatttgcacaaggacaagtccatattcaaggtcgaccagttg
cctgtggaccgctatgcagagtccttgggccttccgggaacgccgaagatcaagttcctt
agcaaagagctggcgaagcagaagaagaacgcatcgcgtgcggtcgcggcggcgaaatcg
tcggctgaagctaactcatccgaagaggacagcgacgcagaagacgccgatgtgcactca
tcgagtgacgaagaggctgaggacgaggcggagtcttcgtctaagcctaaacgcaagcct
ggagaagtgcgcaccaaatacgaccgcatgttcgagcgcaagaaccaggacatcctctca
tcgcactactcgaagatggttgagcgcgacgacgacggctcaggctctgaagacgacttc
atcaccctcgcccgcgccgaccacgacctacccgaccccgacgacagcctgcccaagacc
ttcgcgcaagcaaagcaggagaacctctccgcaaagaaaaaggcgaagatgagccgcacc
gggcgcgcggtcgtcgagaacggccttggccgcaagctcgtgtttgacgacgagggccgc
gagcacgagctatacgagctagcgaacggcgaggagtggttcaaggagaagggcgggctg
gagggcgcgatccgggaaggcgcgaagttcgcggagggcgaaagggagcggatgcagaag
acggatgtggtggatcgagaggaggcgaaggagaagaagagggaaaggaagaggaagagg
aaggaacgcgagcgggagatgatggcggcggaggggttggcggtagtggcgccggcggag
gatgcggggtacgtgtcgccggacttcgatctgcctagcggggatgaagacgaaggcgag
gtcgcgccgccgccgccgcctgcaaaacgacgaaaggcagtcgcggaacgtgacgagttg
gaggatgatgaggcgttggcgctgcagttattgcggagtcgcaggtag
DBGET
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