Schizophyllum commune: SCHCO_02586217
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Entry
SCHCO_02586217 CDS
T01331
Symbol
SCHCODRAFT_02586217
Name
(RefSeq) DEAD-domain-containing protein
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scm01009
]
SCHCO_02586217 (SCHCODRAFT_02586217)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02586217 (SCHCODRAFT_02586217)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02586217 (SCHCODRAFT_02586217)
Protein phosphatases and associated proteins [BR:
scm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SCHCO_02586217 (SCHCODRAFT_02586217)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCHCO_02586217 (SCHCODRAFT_02586217)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
ResIII
ERCC3_RAD25_C
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
9591260
NCBI-ProteinID:
XP_003029840
UniProt:
D8QCI5
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MDDDIILNFADDDHAPLRKGKNKGTRADRIKAKRVAKRKSDAASAEVADQRPAKKPRNEV
AEDRPQAQPAQPKAGQTHIISSLFSHNPRVEAPEPSSAPKTPSAPSNAPLDTSTFSGLGL
NPLLIAHLEKKLSITKPTAIQRAALPALLGRLSAENALRDVFIQAQTGSGKTLSYLLPII
QDLLPLSSDSYIDRSIGTLAVIIAPTRELAQQISDVLENLLKLRLRAEDEGADSSSSARL
TRWLVSGLLIGGGTRTHEKARLRKGLPILVATPGRLLDHIQNTSSFNVGKCRWLVLDEAD
RLMELGFEDTIKGIIQGLDGRRRLAIQAAKQGVSTEVGGWDWERGRRTILCSATIKDDVQ
KLAGTALVNPLMIAATTHDEPKLGEGIDAPVASDKFTPPSQLAQKYVIAPLKLRLVMLVA
LLRSLIAKAQGRGTKIIVFLSCTDSVDFHWELLGNASMNDTQQDSSDSDEEDEDQEVNED
GEENTKKSSRRPNDTSTTSHLLPGTTIYRLHGSLPTQTRIATVRGFSSKNPTSVLFCTSV
ASRGLDLPLVRAVIQYDLPTEGGATEYVHRVGRTARAGKGGEAWSIVAPSEAEWVKWVEA
KMRGDENKQDDAKHNITLTGVSMETVLRSGFGGKGTEPQERATEVQLAFERWVLRKEHSE
LARKAYLSHMRAYATHPSSEKHIFHIRHLHLGHLAKAFALREAPKAVTNRKSTDGNAKAK
KAPKGSNAKSREWEATHSGEAERRMQEVVRAQGKLTKKGGMLRAADTSEFQIAGTAALEK
MLQGSL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatattatcctcaactttgcggacgacgaccatgcgccccttcgcaagggg
aagaataaggggacgcgcgctgacaggataaaggcgaagcgcgtagccaaaagaaagtcc
gatgcagcttccgcagaggtagcagatcagaggcctgcgaagaagcccagaaatgaggtg
gcagaggataggccacaagcccagccagctcagcccaaggccgggcaaactcacatcatc
tcctccctcttctcccacaaccctcgcgtcgaagctcctgaacccagctccgcacccaag
actccatccgcacctagtaatgcccccctcgatacctctacgttctctggtctcggtctc
aacccccttctcatcgcacacctggagaagaaactctccatcacaaaacctaccgccata
cagcgcgcggccctccccgccctgttaggccggctatccgcagagaacgccctccgcgat
gtcttcatccaagcccaaaccggctccggcaagaccctctcctacctcctccccatcatc
caggacctcctccccctcagcagcgactcctacatcgaccgctccatcggcacgctcgcc
gtcatcatcgcccccacgcgcgagctcgcgcagcagatctccgacgtcctcgagaacctt
ctcaagctccgcctccgcgccgaggacgagggcgcggactcttcgtcctctgcgcgcctc
acgcgctggctcgtctcggggctgctcatcggcggcggcacgcgcacgcacgagaaggcg
cgcttacggaagggcctgcccatcctcgttgccacgcctggcaggctgctggaccacatc
cagaacacctcgtcgttcaatgtgggcaagtgtcgctggctcgtgctcgacgaggccgat
cggctcatggagctcggcttcgaggacacgatcaagggcatcattcaaggcctcgacggg
cggcggcgcctcgcgatacaggccgcgaagcagggcgtgtcgacggaggtgggcggctgg
gactgggagcgcgggcggcggacgatcttgtgctcggcgacgatcaaggacgacgtgcag
aagctggcgggcacggcactggttaacccgcttatgattgctgcgacgacgcacgacgaa
ccgaagctgggagaggggattgacgcgcctgtcgcttcggacaagtttacgcccccttcg
cagctggcacagaaatacgtgatcgcgcccttgaagctcaggcttgtcatgctcgtcgcc
ctgctgcgctcgctgatagcgaaggcgcagggccgcgggacgaagattatcgtctttctt
agctgcaccgactcggtcgactttcactgggaacttctcggaaacgcgagcatgaacgac
acccaacaggacagctctgattccgacgaagaagacgaggatcaggaagttaacgaagac
ggcgaagaaaacaccaagaaatcctcccgccgacccaacgacacctcgaccacctcccac
ctcctccccggcactaccatctaccgccttcacggctccctccccacgcaaacccgcatc
gccaccgtccgcggtttctcctccaaaaaccccacctccgtcctcttctgcacctccgtc
gcctcccgcgggctcgacctgcccctcgtgcgcgcggtcatccagtacgacctcccgacc
gagggtggcgcgaccgaatacgtgcaccgcgtgggccgcacggcgcgtgccgggaaagga
ggtgaggcctggagcatcgtcgcgccgagcgaggcggagtgggtgaagtgggtggaggcg
aagatgcggggggatgagaataagcaggatgatgcgaagcataacatcacgttgacgggt
gtgtcgatggagacggttctgcgtagcgggtttggcggtaaggggacggagccgcaggag
cgcgccacggaggtccagctcgcgttcgagcgctgggtactgcgcaaggagcactccgag
ctcgcccgcaaggcctacctatcccacatgcgcgcctacgccacgcacccctcctccgag
aaacacattttccacatccgtcacctccaccttggtcatctcgccaaagcctttgctctc
cgcgaggcgcccaaggcggtcacgaaccgcaagagcaccgacggcaatgccaaggcgaag
aaggcgcccaagggaagcaacgcgaagagcagggagtgggaggcgacgcatagcggcgag
gcggagcgccggatgcaggaggtcgtgcgcgcgcagggtaagcttacgaagaagggtggg
atgttgagggcggcggatacgtcagagttccagattgcgggtacggcggcgttggagaag
atgcttcagggatcgttatga
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integrated database retrieval system
