Schizophyllum commune: SCHCO_02587698
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Entry
SCHCO_02587698 CDS
T01331
Symbol
SCHCODRAFT_02587698
Name
(RefSeq) Sec63-domain-containing protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02587698 (SCHCODRAFT_02587698)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02587698 (SCHCODRAFT_02587698)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SCHCO_02587698 (SCHCODRAFT_02587698)
Spliceosome [BR:
scm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SCHCO_02587698 (SCHCODRAFT_02587698)
Complex C
U5 SnRNP specific factors
SCHCO_02587698 (SCHCODRAFT_02587698)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
PhoH
Peptidase_C39
ASCC3_N
Motif
Other DBs
NCBI-GeneID:
9591074
NCBI-ProteinID:
XP_050198520
LinkDB
All DBs
Position
Unknown
AA seq
2159 aa
AA seq
DB search
MSGQGKKLSGYNYGDISSLVLTADRSALPRRDKEPDGAPTSLAGRIDPKDMGSRALREAP
KDIEKKKKKAADRTEVADKVKRKAESSRFMAADIIEATQDLEDLTYRPRTAETREIYSLM
LAAVNSALGDEAPDVVRSATDVVLEVLKNEAVKDFDKKKEIEEVVGPLSSEQFSQLLSLS
KKITDYGDEDETMADPDAEKKETEIDDDVGVAVVFDEEEQDEEEDEGFEIGEESDEEEEE
EDAEAPAEGAEGEDEALVIGGEGSKTKKDKADKDIVAPHEIDGFWVQRQISEAYPDPVTA
ADKASAVISILGSESSLRDCENQLMDLFEYQSFHIITKFLKNRDVIFWCTKLMRSDADER
VNVEVAMREKGVGWILRELAGDRQAKTGKGDAMDVDEAKPEVPKTATLAPGSTVQPKRVL
DLESMAFSQGGHLMSNKKCKLPEGSFKRSRKGYEEIHVPAPKKKEPAPSEIVPVEALPAW
AREAFTVPRLNQIQSKLFPVAFGTDEPLLLCAPTGAGKTNVAMLTILNELAKYRDEATGT
FDLDAFKIVYIAPMKALVQEMVGNFSARLKVFGIKVGELTGDSQMTKQQISETQIIVTTP
EKWDVITRKSTDTSYTNLVRLIIIDEIHLLHDDRGPVLEAVIARTIRRMEQTNEYVRLVG
LSATLPNYKDVAAFLRVDESKGLFYFDASYRPCTLQQQFIGVTEKKAIKRYQVMNEVCYE
KVLDQAGKNQTLVFVHSRKETGKTAKYLRDTAVDKETITQFVRPESSTREILLEMASSVK
DPVLADILPFGFGIHHAGMSREDRSLVEELFAEGHIQVLLCTATLAWGVNLPAHTVIIKG
TQIYNPEKGRWTELSSQDVLQMLGRAGRPQYDTFGEGVIITNHSELQYYLSLMNQQLPIE
SQFVAKLADNLNAEIVLGTIRNRDEAVQWLGYTYLYVRMLKDPSLYSVGVDYQVDDVGLV
QKRADIVHSAATLLEKSQLLKYERATGRFHSTELGRIASYFYVTHNSMLVYNKHLRPTMS
TIELFRVFALSNEFKLIPVRQEEKIELAKLLERVPIPVKESVEEPAAKINVLLQAYISRL
KLDGFVLVADMVFIQQSAGRILRAMFEICLKRGWAVPAKACLDLCKMVEKRMWGSMTPLR
QFPDVHPQVIRKAEGKQFPWYRYFDLSPPEIGELIGIPAQGNKVHRLVHSFPKLQLQAQV
QPITRSLLRIDLTITPDFRWDEKYHGTSESFFILVEDVDGEIILFHDQFVLRQRYAEDEH
NVTLTVPMFEPVPPNYYISVVSERWLHAETRLPISFKYLILPEKFPPPTPLLDLQPLPLS
ALHNKEFESIYSSEIKTFNKIQTQVFQALYTTDENVFIGAPTGSGKTVCAEFALLRLWSK
REQPRAVCIEPFQEMVDMRVAEWQAKFSKLQGGKEIVSLTGETSADLRLLEKGDVIVCTP
TQWDVISRRWRQRKNVQNIGLIIADEVQQVGGEVGPTYEVILSRTRYVSAQTEIKTRIVA
CGVSLANARDLGEWIGAPSHDIFNFSPSARPLDMDIHIQSFTIPHFPSLMIAMSKPAYLA
ITEYAPTKPTIIFVPSRRQCRLTVDVLLTHCSADDNPDRFLNADLEAIQPHLDRLSDEGL
KECMKHGIGYYHEALSKQDKRIVQRIFESGAIQVLVASKDTAWSLPVASYMVIIMGVQYY
EGKEHRYLDYPIMDVLQMMGRACRPREDDRSRCVLMCQQTRKDFYKKFLAEGLPIESHLP
TNMIHDYFLAEIAVKTIENKQDAMDILTWTYFYRRMTQNPNYYNLHNVSHQHLSDHLSEL
VENTLSDLQNSQCIAIEDEMDVTALNLGMIAAYYNISYVTVEVYNLSLKERTKLKGLLEV
VASSAEFEMIPIRRHEDVLLRRIYERVPVKVDSVNYEAPHFKTFLLLQAHFSRIQLPPDL
AADQVLVLEKVLNLLSACVDVMSSNAWLNALGAMDLSQMCVQAMWETDSPLKQLPHFEPE
VIKRFQAAGIENIYDFQQMDDDQRTELLQMDAAQTRDVAVMANAFPNLDVSYELVKGEYT
AGAPIHLKVTLARDVDEDDEDDEQIVVAPFYPAKKMVNWWLVVGEPNTRQLLVIKKVTFN
KALNVKLEFTLTKGQHNLKLFVICDSYVGADHDIPLEPVDVAEGEDSDDDDDSDEDMEE
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccaggggaaaaagctgtctggctacaactacggggacatctcgtcccttgtc
ctcaccgcagaccgctctgcgctccctagacgcgacaaggaaccggatggcgcaccgact
tcactggcggggcgcatcgaccccaaagacatgggctcccgagccctgcgggaagcaccc
aaggacatcgagaagaagaagaaaaaggcagcagaccgcactgaagtcgccgacaaggtc
aagcggaaggccgagtcctctcggttcatggctgcagacatcattgaggcgacccaggac
cttgaggacctcacataccgcccccgcaccgccgagacccgcgagatctactccctcatg
cttgctgcagtcaactctgccctaggggacgaagcacctgacgtcgtacgaagcgccacg
gacgtagtgctcgaggtgttgaagaacgaggcggtcaaggacttcgacaagaagaaggag
atcgaggaagttgtcggccctctgtcgtccgagcagttctcgcagctgctatctctgtcg
aagaagataactgactacggcgacgaggacgagactatggccgaccccgacgcagagaag
aaggagacggagatcgacgacgacgtcggtgttgccgtcgtgttcgacgaggaggagcaa
gacgaagaggaggacgaaggctttgagattggagaggagtctgacgaagaagaggaagaa
gaagacgcagaggccccagccgagggtgcggaaggggaggacgaggcgcttgtgatcggg
ggggagggttcgaagacgaagaaggacaaagccgacaaggacattgtcgccccacacgaa
atcgacggtttctgggttcaacgccagatctcagaagcctaccccgaccccgtcactgcc
gccgacaaagcatctgctgtcatctccatcctcggttctgagtccagcttgcgcgattgc
gagaaccagctcatggacctcttcgagtaccagagcttccacatcatcaccaagtttctc
aagaaccgcgatgtcatcttctggtgcacaaagctcatgcgtagcgatgcggacgagcgt
gtcaacgtcgaggtggctatgcgcgagaagggcgttggctggatcctgcgcgagctcgcc
ggtgacaggcaggcgaagactgggaagggggatgctatggacgtcgacgaggccaaacct
gaggtccccaagacggcgacgctggctcctggcagcacggttcagccaaagcgcgtactc
gacctcgagagcatggctttcagccagggtggtcaccttatgtcaaacaagaagtgcaag
ctgcccgaaggctcgttcaagcgctcgcgaaaaggttacgaggagattcacgtcccggcg
ccgaagaagaaggagcctgccccctccgagatcgtgcccgttgaggcgctcccggcgtgg
gcacgagaggcgttcaccgtcccgcgcttgaaccagattcaaagcaagcttttccccgtt
gcttttggcacggatgaaccattgcttctctgtgcacctaccggtgcgggaaagacgaac
gtcgccatgttgaccattttgaatgagcttgcgaagtaccgcgacgaagccaccggcacg
ttcgacctcgacgccttcaagatcgtttacatcgcacccatgaaggccttggtacaggag
atggtcggcaacttctcagcccgtttgaaggtcttcggcatcaaagtcggcgagcttacc
ggtgactcccaaatgacgaagcagcagatatccgagacgcagatcatcgtcactacgccc
gagaagtgggatgtcattacccgcaagagcaccgataccagctacacgaacctcgtccgc
ctcattatcatcgacgagatccaccttctgcacgacgatcgtggacccgtcttggaggct
gttatcgcgcgtaccatccggcgtatggagcagacgaacgagtacgttcgtttggttggg
ttgtcggccacactccccaattacaaggatgtcgcagcgtttcttcgcgtcgacgagtcc
aagggcctcttctacttcgatgcgtcgtaccgcccctgtacgcttcagcagcagttcatc
ggcgtcacggagaaaaaggcgatcaagcggtatcaggtcatgaacgaggtctgctacgag
aaggtgcttgatcaggcgggcaagaaccagacgcttgtcttcgtgcactctcgcaaggag
acgggcaagaccgccaagtacctgcgcgacacggccgtcgacaaggagacgattacccag
ttcgtacgcccggagagcagcacgcgcgagattctcctggagatggcgtctagcgtgaag
gatcccgttctcgccgacatcctccccttcggctttggtatccatcacgccggtatgtcc
cgcgaggaccgttcgctcgtggaagagcttttcgccgagggtcacatccaggtcttgctc
tgtaccgctacgctcgcttggggtgtcaatctgcctgcgcacactgtcatcatcaagggc
acgcagatctacaaccccgagaagggccgctggaccgagctgtcctcgcaggatgtgctc
cagatgctcggtcgcgccggtcgcccgcagtacgacacgttcggcgagggtgtcatcatc
acgaaccactccgagctgcagtactacctgagcttgatgaaccagcagctgcccatcgag
tcgcagttcgtcgcgaagctggcggacaatttgaacgccgagattgtgctcgggactatc
cgcaaccgcgacgaggccgtgcagtggctggggtacacctacctgtatgtccgcatgctc
aaggacccgtcgctatacagcgtcggcgtggactaccaggttgacgacgttgggctcgtg
cagaagcgcgcggatatcgtgcactcggcggctacgcttctcgagaagagccagcttctg
aagtacgagcgcgctaccgggcgcttccacagcaccgagctcggccggatcgcgtcgtac
ttctacgtcacgcacaactcgatgctggtgtacaacaagcacttgcggccgacgatgtcg
acgattgagctgttcagggtgttcgcgctgtcgaacgagttcaagctcattccggtgcgg
caggaagagaagattgagttggctaaactgctcgagcgtgtacccatcccggtgaaggag
agcgtggaggagccggcagcaaagatcaatgtgttgctgcaggcgtacatctcgcgattg
aagctcgatggcttcgtcttggtcgccgacatggtcttcattcaacagtcagccggccgt
atccttcgtgccatgttcgagatctgcctcaagcgtggatgggctgttcctgcgaaggcg
tgcttggacctttgcaagatggttgagaagcgaatgtggggttctatgacgcctttgcgc
cagttcccggatgtgcatcctcaggtcattcgcaaggctgagggcaagcaattcccttgg
taccgctacttcgatttgagcccgcccgaaattggcgagttgattggcatcccggcccag
ggcaacaaggttcaccgcctggtccacagcttcccgaagcttcaattgcaggcacaggtt
cagcccatcacccgctcgcttctgcgcatcgacctaaccatcacgcctgacttccgatgg
gacgagaagtaccacggcacgtcggagtcgttcttcatccttgtcgaggacgttgatggc
gagatcatcctcttccacgaccagtttgtcctgcgtcagcgttatgcggaggatgagcac
aacgtcaccctcactgtgccgatgtttgagcccgttccccccaactactacatctcggtc
gtgtctgagcgctggctccacgccgagacgcgcctgcccatatccttcaagtacctcatc
ctgccggagaagttcccaccacccacccctctcctcgacctccagccgctcccgctgtcc
gcactccacaacaaggagttcgagagcatctactcctcggagatcaagacgttcaacaag
attcagacgcaggtgttccaggcgttgtacaccaccgatgagaacgtcttcatcggcgca
cctaccggcagcggcaagactgtctgcgccgagttcgctcttctgcgcctatggagcaag
cgcgaacagccgcgggcagtgtgcatcgaaccgttccaggagatggtggatatgcgggta
gcagagtggcaggccaagttctccaagctacaagggggaaaggagatcgtcagtctcacc
ggtgagaccagcgcagaccttcgcttgttggaaaagggagacgtcatcgtctgcacgcct
acccaatgggatgttatctcccgtagatggcgtcagcgaaagaacgtgcagaacattggt
ttgattatcgcggacgaggtacagcaagtcggtggcgaggtcgggcccacctacgaggtc
atcttgtctcgcacaagatacgtgtctgcgcagacggagatcaagactcgcatcgttgcc
tgcggtgtgtccttggccaatgctcgcgaccttggagagtggatcggcgccccttcacac
gatatcttcaacttctcgccaagtgctcgtcctcttgacatggatatccacattcagtcc
ttcaccatcccccacttcccctcccttatgattgcgatgtcgaagcccgcttacttggca
atcacagagtacgcaccaaccaagccgaccatcatctttgtgccatctcgtcgccaatgt
cgcctcactgtggacgtccttctcacacattgctctgccgatgacaaccctgaccggttc
ctcaatgccgacctcgaagccattcagcctcacttggaccgcttgtcggacgagggcctg
aaggagtgtatgaagcacggcatcggctactaccacgaagcgttgagcaagcaggacaag
cgcatcgtacagcgtatcttcgagtctggtgccatccaggtgcttgtggcgagcaaggac
accgcgtggagtcttcccgttgccagctacatggtcatcatcatgggtgtccagtactac
gagggcaaggagcaccggtacctcgactacccgatcatggacgttctgcagatgatgggc
cgtgcctgccgtccaagagaggacgaccggagtcgctgcgtgctcatgtgtcagcagacg
cgcaaggacttctacaagaagtttctcgcggagggcctgcccatcgagtcccacctgccg
acgaacatgattcacgattacttccttgcggagatcgcggtgaagacgatcgagaacaaa
caggatgcgatggatatcttgacgtggacgtacttctacaggcggatgacgcagaacccg
aactactacaacttgcacaacgtcagccaccagcacttgtccgaccacctgtccgagttg
gtggagaacacgttgagcgacttgcagaattcgcagtgcatcgcgatcgaggacgagatg
gacgtcactgccctgaacttgggtatgatcgcggcgtactacaacatctcttacgtcacc
gtcgaggtctacaacttgtcgctaaaggagcgcacgaagttgaagggcttgctcgaggtt
gtcgcttcttccgccgagttcgagatgatccccatccgccggcacgaagacgtcttgctg
cgtcgcatctacgagcgcgtgcccgtcaaggtcgactctgtcaactacgaggcaccgcac
ttcaagaccttcctgctgctccaggcgcacttctcgcgcatccaattgccgccagacctt
gctgccgaccaggtgctcgtgttggaaaaggtgctcaacttgctatccgcctgcgttgat
gtcatgtcgtcgaacgcatggctgaatgcgcttggggcgatggacttgtcgcagatgtgt
gtgcaggcgatgtgggagacggactcgccattgaaacaattgccgcacttcgagccggag
gtcatcaaacgcttccaggctgcaggcatcgagaacatctacgacttccagcagatggac
gacgaccagcggacggagctgttgcagatggacgctgcgcagacgcgcgacgttgccgtc
atggccaatgccttcccaaacctcgatgtctcgtacgagctggtgaagggcgagtacact
gccggcgcacccatccacctaaaagtcactctcgcccgcgacgtggacgaggacgacgag
gatgacgagcagatcgtcgtcgcgccgttttatccagcaaagaagatggtcaattggtgg
ctcgttgtcggcgaaccaaatacgcgacagctgctggtcatcaaaaaggtcaccttcaac
aaggcgctgaacgtcaagttggagttcacgttgacgaagggtcagcacaacctgaagctg
ttcgtcatctgcgactcctatgttggtgcggaccacgacatccctctcgagcccgtcgac
gtggcagagggcgaagatagcgacgatgatgatgattctgatgaggacatggaagagtag
DBGET
integrated database retrieval system
