KEGG   Schizophyllum commune: SCHCO_02590705
Entry
SCHCO_02590705    CDS       T01331                                 
Symbol
SCHCODRAFT_02590705
Name
(RefSeq) PIN domain-like protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
scm  Schizophyllum commune
Pathway
scm03030  DNA replication
scm03410  Base excision repair
scm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SCHCO_02590705 (SCHCODRAFT_02590705)
   03410 Base excision repair
    SCHCO_02590705 (SCHCODRAFT_02590705)
   03450 Non-homologous end-joining
    SCHCO_02590705 (SCHCODRAFT_02590705)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scm03032]
    SCHCO_02590705 (SCHCODRAFT_02590705)
   03400 DNA repair and recombination proteins [BR:scm03400]
    SCHCO_02590705 (SCHCODRAFT_02590705)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scm04147]
    SCHCO_02590705 (SCHCODRAFT_02590705)
DNA replication proteins [BR:scm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SCHCO_02590705 (SCHCODRAFT_02590705)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SCHCO_02590705 (SCHCODRAFT_02590705)
DNA repair and recombination proteins [BR:scm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SCHCO_02590705 (SCHCODRAFT_02590705)
Exosome [BR:scm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SCHCO_02590705 (SCHCODRAFT_02590705)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 9597310
NCBI-ProteinID: XP_050197934
LinkDB
Position
Unknown
AA seq 596 aa
MGVLGLTPFLQKVCPEAIHKLPDRLRGLTGKTIVIDGTLITQRFHFAPLPHRYRHVLGWY
RLMQEVRESGVNAICVFDGKERSMAKAREVSRRRETRALAMARGALEVERLRRLRGLEPL
LERFSRLDDAERTRILEALKASAKPISGLDALSHEQELISATVAASNSAETYTRAVEDYV
NRIEDEDSAAGTYDSVPDVEDVWHVANSHPPVRTQTSALPQSQRTETLPSPEDEDVEPLD
DLEGDPLPDPHTSLPGLLTQEQEHDLPPLPPADGELPTTSAVSPTDITTLLISLYQEYRS
SIPKVAALTVAPATPESQSDAQSDMIMTKEQRQLTLDEGGFWKELQTSRAYSTRGSSGSA
KAKSKYAIDTLMQKSALMHASFDRRAHPPTEATYRESKEILAALGVPCVDATGAFEAEAL
ASAMVLGGLADYVVSEDTDVLVYGAPLLRNLSNRQGPLVLLPASLWDLLHLSRKEYVDFA
LLLGTDFSQRIKNVGPARALKFIRTHGSIERIVDEETKYPPRIPVEEYLHSVAVARAIFA
TLPALPAPEALQQGEMDEVQVNEVLHKYDLETYLRDDEWDYDSGVGTSFFGDDPRT
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgggagttctaggcttgacgcctttcctccagaaagtctgcccagaggctatccacaag
ttaccagaccgcctgaggggactgacgggcaagacgatcgtcatcgatggcacgctcatt
acacaacgctttcacttcgcaccgctccctcataggtatcgacacgtcttgggatggtac
cggttgatgcaggaagtgagggagagcggcgtgaacgcgatctgcgtcttcgacgggaag
gagcgaagtatggcgaaggcgagggaggtgtccaggaggcgagaaacgcgagcgctagct
atggcccgcggcgcactggaggtcgaacgcctgagacgactgcgtggactagaacccctc
ctcgaacggttcagtcgcctcgatgatgcagagagaaccaggattttggaagccctcaag
gcgtcagccaagccaatctctggtcttgacgcgctctcgcacgaacaagaactcatctcg
gcgactgtggcggccagcaactcagcagaaacatacacgcgcgcggtcgaggactacgtg
aatcgaatagaggatgaagattccgccgcaggaacttacgattctgtacccgacgtcgaa
gacgtctggcatgtcgccaattcgcaccctcccgtccggacccagacttctgctttaccc
caatctcagaggacagagacccttccttccccggaggatgaagacgtcgagcctttggat
gatctcgaaggcgaccccttgcctgacccccacacctcgctgccgggtctactcacacag
gaacaagagcatgacttgcctcctttacctcccgccgatggcgaactccccacaacctcc
gccgtatcacccaccgatatcacaacccttcttatatcgctataccaagaataccgcagt
agcattccaaaagtggccgccctcactgtcgcgccagcgactcccgagagccagagcgac
gcgcagtcggacatgattatgaccaaggaacaaaggcaactcaccctcgacgagggcggc
ttctggaaggagctacaaacctcgcgcgcttattctacccgaggttcttctggttctgct
aaggcgaaatcgaaatacgccatcgacaccttgatgcagaagagcgctctgatgcacgcg
tctttcgaccgtcgagcacatccaccgacagaagcgacatatcgagaaagcaaagagata
cttgccgcgctgggtgtgccgtgcgttgacgcgactggcgcttttgaggcggaggcgcta
gcttccgcgatggtccttggcggccttgctgactacgtcgtcagcgaagataccgacgtc
ttggtctacggcgcacctctcctacgcaatctcagcaaccgacaaggacctctcgtcctg
ctgccagcgtctctctgggacctccttcacctctcgcgcaaggaatacgtcgatttcgct
ctcctcctcgggaccgacttttcgcaacgcatcaagaacgtcggtcccgcgcgcgctctc
aagttcatccgcacccacggcagcattgagcgcatcgtagatgaggagacgaagtacccg
ccacggatacccgtcgaggaatacctgcactcagtcgccgttgctcgtgccatcttcgcg
accctcccggccctgccggcacccgaggcgctgcagcagggcgagatggatgaagtgcag
gtgaatgaggtactgcacaagtacgatctggagacctacctgcgcgacgatgagtgggat
tacgacagcggagtcggtaccagcttctttggcgatgaccctcggacataa

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