Schizophyllum commune: SCHCO_02596928
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Entry
SCHCO_02596928 CDS
T01331
Symbol
SCHCODRAFT_02596928
Name
(RefSeq) cyclophilin-like protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
scm
Schizophyllum commune
Pathway
scm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SCHCO_02596928 (SCHCODRAFT_02596928)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02596928 (SCHCODRAFT_02596928)
03110 Chaperones and folding catalysts [BR:
scm03110
]
SCHCO_02596928 (SCHCODRAFT_02596928)
04121 Ubiquitin system [BR:
scm04121
]
SCHCO_02596928 (SCHCODRAFT_02596928)
Enzymes [BR:
scm01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
SCHCO_02596928 (SCHCODRAFT_02596928)
Spliceosome [BR:
scm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SCHCO_02596928 (SCHCODRAFT_02596928)
Complex C
U4/U6.U5 tri-SnRNP related factors
SCHCO_02596928 (SCHCODRAFT_02596928)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
SCHCO_02596928 (SCHCODRAFT_02596928)
Chaperones and folding catalysts [BR:
scm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
SCHCO_02596928 (SCHCODRAFT_02596928)
Ubiquitin system [BR:
scm04121
]
Ubiquitin ligases (E3)
U-box type E3
SCHCO_02596928 (SCHCODRAFT_02596928)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
U-box
Rtf2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
9584845
NCBI-ProteinID:
XP_003038553
UniProt:
D8PP87
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MGHGNSNKLYITHQEHAGFFGNHSSSTGYKKKSEAPHPGTRTPFDCCALSFQPFSHPVCA
RNADGTGTVFDLTNIIPWLKQHNNTHPITKEPLTPADLIPLHYAHKESSGETIDPISYKP
FSEHSHIVAIATTGNVFLADSIKGNRDLVNDVPFKKQDVITLQNPHGLPPASVPTTAAST
SKTDDKTKDEKAVTKPATSGPVAALKKEKDPWNVSPYSSGAPGASLTSTSVDPQTQSSKL
LWDEEELMFEDFHNSAKGKGKEKDVGKRRAYVRVVTSLGGGSLNLELYCEKDHQAPKTCY
NFLQLAKAGKYNDVLFHRLVPGFMASLASTRVIQTGDPTGTGSGGESYWGTPFRDEYDLK
GAARHDSRGTLAMANRGKDTNGSQWYITFRATQHLDHKHTVFGKLVGGEDVLDALEKVPV
KPGTDRPARSIHIKEVIIYQDPFEEYRTRLARKLAKREQQQNTGAGADAQKRKEAGDDIN
WFGVKVGAGQGGIGSGGGGGGVGKYLNLAGAGGGAPKRSAPAAADEDAKKKRKVGFGNFE
AW
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacggaaactcgaacaagctctacatcacccaccaggagcacgcgggcttcttc
ggcaaccactcgtcctcgacaggatacaagaaaaagtccgaagcaccacaccctgggacg
cgcactcccttcgactgttgcgcgctttccttccaacctttctcgcatcccgtatgcgcg
aggaatgcagatgggacggggactgtctttgatttgaccaacatcatcccatggctcaag
cagcacaataacacccaccccatcactaaagaacccctcacacccgctgatctcattccc
ttgcactatgcgcacaaggagtcatctggcgaaactatcgaccccatatcctacaagccc
ttcagcgagcactcgcacattgtcgcaattgccaccactggcaatgtctttctggcagac
agcatcaaggggaatagggatctggtgaacgacgtaccgttcaagaagcaggacgttatc
acattgcagaaccctcatggattgcctcctgcttcggtccccactacagctgcgtcgacg
tcgaagaccgatgacaaaaccaaggatgagaaggctgtcacgaagccagcgacctctggg
cccgtagctgcgctcaaaaaagagaaggatccttggaacgtttcgccttactccagcggc
gcgcctggcgcgtcccttacctctacctccgtcgacccgcaaacgcaatcttcaaaattg
ctgtgggatgaggaagagctgatgttcgaggacttccacaattcggcgaagggcaagggt
aaggagaaggacgttggcaagcggcgcgcgtatgtgcgcgtggtgacgagcttgggtggt
ggcagtctgaacttggagctttattgtgagaaggatcatcaggcgccgaagacttgctac
aacttcttgcaacttgcgaaggctggcaaatacaatgatgtcttgttccacagattggtg
cccggattcatggcaagtcttgcctcgacacgcgtcatccaaactggtgacccaactgga
accggcagtggtggcgagtcctattggggaacgccctttcgtgacgagtacgacctcaag
ggcgccgcgcggcatgacagccgaggtaccctagctatggccaaccgcgggaaggacacg
aatggctcccaatggtatatcaccttccgcgccacacaacacctcgaccacaagcacacc
gtgttcggcaagctcgtcggtggcgaggatgtgctcgacgctctcgagaaggtgcccgta
aagcctggtacggataggccagcgcgaagtattcatattaaggaggttatcatctaccaa
gaccccttcgaagaataccgcacccgcctcgcgcgcaaactcgccaagcgcgagcagcaa
cagaacaccggtgccggtgccgacgcgcagaagcgcaaagaggccggcgacgatatcaac
tggttcggcgtgaaggtcggcgcagggcagggtgggatagggagcggtggtggcgggggt
ggggtggggaagtatctgaatctagcaggggctggcggtggagcgccgaagaggtccgcg
ccagcagcggcagatgaggacgcgaagaagaagcggaaggttgggtttgggaacttcgag
gcgtggtag
DBGET
integrated database retrieval system
