Schizophyllum commune: SCHCO_02601119
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Entry
SCHCO_02601119 CDS
T01331
Symbol
SCHCODRAFT_02601119
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
scm
Schizophyllum commune
Pathway
scm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCHCO_02601119 (SCHCODRAFT_02601119)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02601119 (SCHCODRAFT_02601119)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SCHCO_02601119 (SCHCODRAFT_02601119)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Inhibitor_I42
DUF7366
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
9587942
NCBI-ProteinID:
XP_003030452
UniProt:
D8Q8X1
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MYGRGKDDQEAADSTTDPGFVSFFSHLPKKSPETGTLRLFHRQGPDEFYSCYGPDALFVA
NYVFHTNSVIKYLGHGGRATGLPTVHLKTTVAQSLLRDALTVKQLKVEIYVPESGQGKRA
TKFHLDKEASPGNLQQVEDILFTNSDMTTAPIVMAITLASTPAAGGKTKLKTVGVAYADT
SLRELGVADFVDNELYSNTESLIIQLGVKEAVIPMGTSSGTSERDLDLNKLRSVLDRCGV
VITERKPSEFRDKNVADDVPRLLVATPGTSTADPTATIPELSLPNAKGALNALLGYLSLL
ADPANHNAWTIRTHDLEQYMKLDASALRALNLVDMTGQSGQSNKNTTLLGLLNKCKTAQG
TRMLGTWLKQPLVNLHEIQKRQELVQIFFDDANARQTLQDEYLKMMPDMHRLGRRFQKGL
ATLENVVRVYQVILKLPGMIEALEAVRTETPEHQALIEETYLRELRDKEASLSKYSQMVE
QTLDLDQLDNHNYVVKPDYDEQLQELHNKLQEATEKLDQEHRRVGEDLNIELDKKLHLEN
NPTYGYCFRLTKNDAKGITNKKDKYIELATNKSGVYFVTKKLKTAAADHKELTQAYSRKQ
SGLVKEIVAIAATYTSVMESLDSVIAHLDVIISFAHVSVNAPVTYVKPKVVERGNGSLIL
KEARHPCLEVQDEVNFIPNDVEMIKDKSEFQIITGPNMGGKSTYIRQVGVIALMAQTGCF
VPCDKATLPIFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGT
STYDGFGLAWAISEHIASQIHAFCLFATHFHELTALDQQLPHVTNLHVVAHVSGDSSGDT
SDITLLYKVEPGVSDQSFGIHVARLANFPENVVKLAKRKADELEDFGSEDKRSAPEAPPE
VTEEGLKIVEDLLKQWAGEPDGEDVEMADVDDSPEAQLEELKKIVNAHKEQIEGNEWLKK
VITAL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaggggaaaagacgaccaggaagctgcagactcgactactgaccctggattc
gtctccttcttctcacatctccccaagaaatcgcccgagacgggcacactccgcctcttc
catcgccagggccccgacgaattttactcctgctatggtccagacgccctcttcgtcgca
aactacgtcttccacaccaactctgtcatcaaatacctaggccatggcggacgcgcgacc
ggcctacccacggtccacctgaagaccactgtcgcgcaaagcttgttacgagatgcgctc
accgtgaagcaactgaaagtggagatatacgtccccgagagcggccagggcaagcgcgcg
acaaagttccatctggacaaggaggcctccccaggaaacttgcagcaagtcgaagacata
ctgttcaccaactcggacatgacaactgcccctatcgtcatggcgatcacccttgcaagc
acgcccgcggctggtggcaagaccaagctgaagacagtcggcgtcgcctacgccgacacg
agcctgcgggagctcggtgtagctgacttcgtggacaatgaactttactccaatacagag
tccctcatcatccagcttggcgtgaaagaggctgttatccctatgggcacgtcgagtgga
acgtctgagcgcgacctagacttgaacaagctgcggtcggtgctggaccgatgtggtgtc
gtgatcacggagcgcaagcccagcgagttcagggataagaacgttgcggacgatgtcccg
cgcttgctggtagcaacccccgggacctcaacagccgatcccactgcaaccattcccgaa
ctcagcctgccgaacgccaaaggcgcactgaacgcattgctcggctacctcagcctcctc
gccgaccctgccaaccacaacgcatggacaatccgtacgcatgatctggagcagtacatg
aagctagacgcaagcgccttgcgagcgcttaacctggttgatatgactgggcaaagcggc
cagtccaacaagaacacgaccttgctaggcctgctcaacaagtgcaagacagcgcagggt
actaggatgctggggacttggctcaagcagccgctcgtcaacttgcatgagattcaaaaa
cggcaggaactcgtacaaatattcttcgatgacgcgaatgcgaggcagacgctgcaggac
gagtacttgaagatgatgcccgacatgcaccgtctgggacggcggtttcagaaggggctt
gcgacattggagaatgtcgtgcgcgtataccaagtcatcctaaagctacccggcatgata
gaggcgctggaagccgtgcggacggagactccagagcaccaagctttgatcgaggaaacg
tacctcagggaacttcgggacaaagaagccagcctgtccaagtactcgcagatggtggag
cagacgctcgacctcgaccagctcgacaaccataactacgtcgtgaagccggattatgac
gagcagctgcaggagctgcataataagctgcaggaggcgaccgaaaaactcgaccaagaa
catcgcagagtcggcgaggacctgaacatcgagcttgacaagaagcttcatctggagaac
aacccgacgtacggctactgcttccggttgacgaagaacgacgccaaaggcatcacgaat
aagaaggacaagtacatcgagctggcgacgaacaagagcggggtgtacttcgtgacgaag
aagctgaagacggccgcggcggaccacaaggagctaacgcaggcgtactcgaggaagcag
agcgggcttgtgaaggagatcgtggctatcgcagccacatatacctcggtcatggaatcc
ctggatagtgtcatcgcgcacttggacgtgatcattagcttcgcgcacgtctccgtgaac
gcgcccgtcacctacgtcaagcccaaggtcgtggagcgcggcaacggcagcttgatcctc
aaggaggcgcgccacccgtgtctcgaggttcaggacgaggtcaacttcataccgaacgac
gtcgagatgatcaaggacaagagcgagttccagatcatcactggcccgaatatgggaggg
aagtcgacgtacatccggcaggtgggcgtcatcgcactcatggcgcagacggggtgcttt
gtaccgtgcgataaggcgacgctgccgatctttgactccgtgctatgtcgtgtgggcgcg
ggtgacagtcagttgaagggcgtgtcgacgttcatggcagagatgttggagactgcgacg
atcttgcggtcagccaccaaggactcgctcatcatcatcgacgagctcggacgcggcacg
tcaacctacgacggcttcggtctggcatgggcgatttcagaacacatcgcctcccagatc
cacgccttctgcctcttcgccacccacttccacgagctcaccgccctcgaccaacaactc
ccacacgtcaccaaccttcacgtcgtcgcgcacgtcagcggggactcgtccggcgacacc
agcgacatcacgctcctttacaaggtcgagccgggcgtatccgaccaaagtttcggcatc
cacgttgcgcgcctggcgaacttcccggagaacgtcgtgaagttggccaagcgcaaggca
gacgagttggaggactttgggagtgaggacaaacgctctgcaccagaggctccgcccgag
gtgacggaggaaggcctcaagatcgtcgaggacttgctcaagcagtgggcgggcgagccg
gacggcgaggacgtcgagatggccgacgtcgatgactcgcccgaggcgcagctggaggag
ctgaagaagatcgtcaacgcacacaaggagcagatagaagggaacgagtggctgaagaag
gtgatcactgcgctttga
DBGET
integrated database retrieval system
