Schizophyllum commune: SCHCO_02604912
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Entry
SCHCO_02604912 CDS
T01331
Symbol
SCHCODRAFT_02604912
Name
(RefSeq) WD40 repeat-like protein
KO
K11360
transcriptional activator SPT8
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scm03021
]
SCHCO_02604912 (SCHCODRAFT_02604912)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02604912 (SCHCODRAFT_02604912)
Transcription machinery [BR:
scm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SCHCO_02604912 (SCHCODRAFT_02604912)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
SCHCO_02604912 (SCHCODRAFT_02604912)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
9594642
NCBI-ProteinID:
XP_050202706
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MGIELDLEEVPADNEDAEGEPDLEDEQAAQAMLEFDPSDPQQQSSPPQLHEPTPPPPPQP
PPVVHDTAMAVSPPAVTPTARVKRRRSQSPACIRRKQLRRNDFSRPFTVEAIIAIPHPVP
THALASSACISHLLTGSEDGYIRDYDVYTSANGKKNFLTAPQRHHANIIEGTMKAGHLRC
WWENPSTSLHDSHSAGDAPLESVYSLAMHSDALWALSGCRNGLINLFTVRHSPGRLCHVM
RGHTKPISALALDHHEKGFFSASWDGEAIEWDLNTGQQVRHLASHGAQLSCIAVRPENAV
YSDSGSPLSIQPVNDEDTDNVDAKSEGSDFDPLFDDEDENQKPGGLAMPAESSAPAPKHI
PPVLDAQRWITFSPDILMTASIDGQIVLWDKRVKTSGYDPFNGWQGVGRLYMSEKTRPWC
MSATWSADGNQVYAARRNGIVEVYDVRQTGSSRQAPRIWKTIRNPPSSGDVSCVVAFPDS
KHIACASTDNIRLWNVAETGEPDGSMKPRSGVQFRIIPGHHGGFVSQMLIDPGGRYMVTA
SSNRGWHGESTRTVLVHEITTKRPKNEF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgagcttgacttggaagaagttccagccgacaatgaagatgccgagggcgaa
cccgacctcgaagatgagcaagcggcccaagcgatgctagagtttgacccatcggatcca
caacagcagtcatctccgcctcaactacatgaacccactcctcccccgccacctcagcct
cctccggttgtccacgatacggctatggccgtatctccgcctgctgtgacacccacagca
agggtgaagcgcagacggtctcagtctcctgcttgtatccggaggaagcagctccgtcgg
aacgacttctcgcgccctttcaccgtagaagctatcattgccattccgcatcctgtgccc
acacatgctttggcgtcatctgcttgcatcagccacctcttgacaggctctgaggacggc
tatatccgtgactacgacgtctatacttccgccaacggaaagaagaacttcttgaccgcg
ccgcaacgacaccatgcgaatatcatcgagggcacaatgaaggcgggacacctgagatgc
tggtgggaaaacccctcgacatcgctgcatgacagccacagtgcgggtgacgcgccactt
gaaagcgtctacagcttagccatgcactcggatgcgctctgggcgctatctggttgtcgg
aacggtctgatcaacttgtttactgtgcgccatagtcctggtcggctatgccatgttatg
cggggtcatacgaagcccatatccgctttagcactcgatcatcacgagaaggggttcttc
agcgccagttgggacggcgaagctatcgaatgggacctcaacaccggccagcaagtccgc
cacctcgcgtcgcacggtgcacagttgtcctgcatcgccgtgcgacccgaaaatgctgtc
tattcagattctggctccccgctcagtatacagcctgtcaacgacgaggacacggacaac
gtggacgccaaatccgaaggctccgactttgatcctctgtttgacgacgaagacgagaac
cagaagccaggcggcctcgcaatgccagcagagtcctcggcgcctgcaccgaaacatatc
cctcctgttctcgacgcgcagcgctggattacgttctcgcccgacatacttatgacggca
agtatcgacgggcaaattgtcctttgggacaagcgcgtaaaaacctccggctacgaccca
ttcaacgggtggcagggcgtcgggcggctgtacatgagcgagaaaacgcggccgtggtgc
atgtctgcgacctggtccgcggacggcaatcaggtctacgctgcacgtcgcaacgggatc
gtggaggtatacgacgttcggcagacggggtcgtcaaggcaggcgcccaggatctggaag
acgattcgcaatccgccgagctcgggggacgtctcctgcgtcgtggcgttccctgactca
aagcacatcgcctgtgcgtcaacggacaacatacgtctctggaatgtcgccgagacgggc
gagcccgacgggtccatgaagccacgcagcggcgtccagttcaggatcatacccgggcac
cacggaggattcgtctcccagatgcttatcgaccccggagggaggtacatggtcactgca
agcagcaatcgcggctggcacggcgagtccacgcgcacggtactcgtgcacgagatcacg
accaaacgccccaagaacgagttttaa
DBGET
integrated database retrieval system
