Schizophyllum commune: SCHCO_02605042
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Entry
SCHCO_02605042 CDS
T01331
Symbol
SCHCODRAFT_02605042
Name
(RefSeq) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scm03016
]
SCHCO_02605042 (SCHCODRAFT_02605042)
Enzymes [BR:
scm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCHCO_02605042 (SCHCODRAFT_02605042)
Transfer RNA biogenesis [BR:
scm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCHCO_02605042 (SCHCODRAFT_02605042)
Prokaryotic type
SCHCO_02605042 (SCHCODRAFT_02605042)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
9594624
NCBI-ProteinID:
XP_050202718
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MPKVATNAYPVSGLFAIAKPSGPTSMSLLNDLQPLIATSKLFVSEDKIKELKKNKKPSSK
KYRQAVKIGQGGTLDPLADGVLVVGIGKGTKKLNEFLLCSKEYRTTALLGCETDTYDSEG
SQVRQAHWRHVTREAVEAAIPQFVGEILQTPPIFSALKMEGKPLYEYARNGIPLPRPIEA
RKVTVHSLEVDEWLGSKHAFKLPEKRLTDAEREKLEAALRGIQPDAKVQDEPEPAPTEAA
NATEDAAAPAVDSSTAQASAEETASAPTAAAEPKDTLEHPTAFSLKMTVSSGTYVRTIVH
DLAHAVGSAGHVVVLTRTRQGRFKLGDSVASRTTPGAPKETAEASSSAATEGAADDAPST
AEEPSTSTVEGAAQNAAPAAATSDATLEPSPTTVAIPWTIFERAIKGEDGPPDAEGWREW
EREVMAKMEVV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggttgcaaccaacgcttaccccgtctcggggctcttcgccatcgcgaagcca
tcggggccgacgtccatgtcgcttttgaacgacctgcagccgctgattgcgacgagcaag
ctgttcgtcagcgaggacaagatcaaggaattgaagaagaataagaagccgagcagcaag
aagtacaggcaggctgtaaagatcgggcaagggggaactcttgaccccctcgctgacgga
gttcttgttgtcggaataggcaaggggaccaagaagctcaacgagttcttgctatgctca
aaggaatatcggacgacggctctcctcgggtgcgagacagatacatacgatagcgagggc
tcgcaagtacggcaggcgcactggcggcatgtcacacgcgaagcggtcgaagctgcgatc
ccgcaattcgtgggggagatcctgcagacaccaccaatcttctccgcgctcaaaatggag
ggcaaacctttgtacgaatacgcccgtaacggcataccgctcccgcggcctatagaagca
cgaaaggtcacggtacactccctcgaggtcgacgaatggcttgggtcaaaacacgcgttt
aagctacccgagaagcggctgacagacgcggagcgcgagaaattggaggcagcgctacgc
ggaatacagccggatgcgaaggtgcaggacgagcccgagcctgcaccgacagaagcagcg
aatgccaccgaggatgctgccgctcccgccgtcgactctagcactgctcaagccagcgca
gaagagacggcgagtgctcctacagccgccgcggaaccgaaggacactttggagcatccc
actgcctttagcctcaagatgactgtctcctccggcacctatgttcgcacgattgtgcac
gacttggcgcatgcagtagggagcgcaggacatgtcgtggtactaacgaggacacgacag
ggtcgctttaaactgggtgactcagtcgcctcgcgaaccacccccggtgcgcccaaagag
acagcagaggcaagctcctctgccgctaccgagggcgccgccgatgatgcgccctctacc
gccgaggagccctcgacctctacagtcgaaggcgccgctcagaatgccgcacccgcagct
gccacttccgatgctacactcgagccctcgccaaccactgttgcgattccctggaccatc
ttcgagcgtgccattaaaggcgaggacggcccgccggacgcggagggctggcgtgaatgg
gagagggaggtcatggcaaaaatggaggtggtatag
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