Schizophyllum commune: SCHCO_02605771
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Entry
SCHCO_02605771 CDS
T01331
Symbol
SCHCODRAFT_02605771
Name
(RefSeq) uncharacterized protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
scm
Schizophyllum commune
Pathway
scm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCHCO_02605771 (SCHCODRAFT_02605771)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02605771 (SCHCODRAFT_02605771)
Enzymes [BR:
scm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
SCHCO_02605771 (SCHCODRAFT_02605771)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
SCHCO_02605771 (SCHCODRAFT_02605771)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
SCHCO_02605771 (SCHCODRAFT_02605771)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
SCHCO_02605771 (SCHCODRAFT_02605771)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
SCHCO_02605771 (SCHCODRAFT_02605771)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
zf-C2H2_2
Dynein_light
zf-C2H2_4
DUF6907
Motif
Other DBs
NCBI-GeneID:
9596079
NCBI-ProteinID:
XP_003035251
UniProt:
D8PSJ9
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MAANDWKTALQTYAAFPDPSVLPKDVYHSHSDHTLTLYAQWPKSTYHMIVIPRIRPPSTG
ARLLNLRTLLHGDKQQAEEVIDQLKDDADEVVEWIQEQMDKKQGYRWNIWLGFMANPSVN
HLALHVVSGDLVSEHMKNKRHYNEFHPKNGYFIRLKHVLEWFEADAPGYWSMVTRLDPVE
YERKLQEPLECFHCYEEFRTMPRLKAHLKEHMERTKERELARMEGKKRIERAFEASRKRK
IEAEAREKALEDAGSSSE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaacgactggaagaccgccttgcagacctacgctgcattccccgaccctagc
gtccttcccaaggacgtctaccacagtcactccgaccacaccctcacgctttacgcgcag
tggccgaagagcacgtaccacatgattgtcatccctcgcatccgtccgccttccaccggc
gccaggctcctgaaccttcgcacgctcctgcacggcgacaaacagcaggctgaggaggtc
atcgaccaactcaaggacgatgcggacgaggtcgtcgagtggatacaggagcagatggac
aagaagcaggggtataggtggaacatctggttgggcttcatggcgaatccgagcgtgaac
catctggccctgcatgtcgtctccggtgacctcgtcagcgagcacatgaagaacaagcga
cactacaacgagttccaccccaagaacgggtacttcatccgcctcaagcatgtcctcgag
tggttcgaggctgacgctccgggctactggtccatggtgaccagactcgacccggtggag
tacgagaggaagctacaggagccgcttgagtgcttccactgctacgaggagtttaggacc
atgccccgcctgaaagcgcatctcaaggagcacatggagaggaccaaggagagggagctg
gcgaggatggagggtaagaagcgaatcgagcgtgcgtttgaggcgtcaaggaagaggaag
atagaggcggaagcgcgggagaaggccctcgaggatgctggtagttccagcgagtag
DBGET
integrated database retrieval system