KEGG   Schizophyllum commune: SCHCO_02608038
Entry
SCHCO_02608038    CDS       T01331                                 
Symbol
SCHCODRAFT_02608038
Name
(RefSeq) WD40 repeat-like protein
  KO
K12602  WD repeat-containing protein 61
Organism
scm  Schizophyllum commune
Pathway
scm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCHCO_02608038 (SCHCODRAFT_02608038)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02608038 (SCHCODRAFT_02608038)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     SCHCO_02608038 (SCHCODRAFT_02608038)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Tricorn_2nd Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_Vps41 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_EIPR1 DSE1_N Beta-prop_NUP159_NUP214 PAC11 Beta-prop_ACSF4 CFAP251_N Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR75_1st PD40 ASA1 Beta-prop_WDR11_2nd Beta-prop_HPS5 WDR54 WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_SCAP Beta-prop_ELP1_1st Beta-prop_RIG_1st WD_LRWD1 Peptidase_S9_N Cytochrom_D1
Other DBs
NCBI-GeneID: 9587367
NCBI-ProteinID: XP_003035717
UniProt: D8PV58
LinkDB
Position
Unknown
AA seq 326 aa
MSLVFLEARSATEKHHDSVWGLSWTAQDTVISISADGAIRQWASATGQPYPPNAPPPKPH
TLGLTSLSVSRDGRKALYNSIEGTTRLWDVAGSGEIVGTFESFAKSDDAQSGPSWSVSLH
PEGETYASTGSSGNVTLHDARPGADFGRRLSSISSGRNKFGLSCVFAPDGKRVAMGSETG
QIYLFDVESGMLANTYTSHAMGVRSLAWSADSQLLLSASEDKRMVLHDVRKSEHGGSVTT
FTGHSSWVLSADISVDGRYVLSGSADRTVKVWDMQTRAAVSTIAQDGGEVWSVAWNKAGS
ANGAFVSGSDDGSVKWYRVPGAGDEQ
NT seq 981 nt   +upstreamnt  +downstreamnt
atgagtttagtattccttgaagcgcgctctgcaaccgaaaaacatcatgactctgtctgg
ggtctctcatggacagcccaagatacagtaatcagcatctctgctgatggcgcaatccgt
caatgggcctcagcgacaggccagccttacccgccgaacgcaccgcctccgaagccgcat
acactggggctgacctccctttctgtgtcgcgagatggtaggaaggcgctgtacaacagc
atcgaggggacgacgcgtctttgggacgttgctggcagcggcgagattgtagggaccttc
gagagctttgcgaagtcagatgatgcgcagagcgggccttcgtggtctgtctccctgcac
ccagagggagagacgtacgcgtcgaccggcagctctggcaacgtgactttgcatgacgcg
cgtccgggcgcagactttggacgacgtctgtcgagcatctcgtccgggaggaacaaattc
gggctgtcttgcgtattcgcacccgatggcaagcgcgtggccatgggctcggagacgggg
cagatctacttattcgacgtggagtccggcatgctggcgaacacgtacacatcgcatgcg
atgggtgtccgctctctggcgtggtccgctgattcgcagctacttctcagcgcgtccgag
gacaagcgaatggtccttcacgacgtcagaaaatccgaacatggtgggagtgtaactact
ttcaccgggcactcttcttgggtcctcagtgcagatatatcggtcgatggtcgctacgtg
ctctctggctccgccgataggacggtcaaggtgtgggatatgcagactcgcgcggctgtc
tcgactatcgcgcaggacgggggcgaagtctggagtgtcgcgtggaataaggcgggcagc
gcgaatggtgctttcgtgtctggaagcgatgacgggtccgtgaagtggtaccgcgtaccc
ggtgctggcgatgaacaatga

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