Schizophyllum commune: SCHCO_02609798
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Entry
SCHCO_02609798 CDS
T01331
Symbol
SCHCODRAFT_02609798
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
scm
Schizophyllum commune
Pathway
scm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCHCO_02609798 (SCHCODRAFT_02609798)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02609798 (SCHCODRAFT_02609798)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SCHCO_02609798 (SCHCODRAFT_02609798)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
SCHCO_02609798 (SCHCODRAFT_02609798)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
9585209
NCBI-ProteinID:
XP_003038915
UniProt:
D8PKP9
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MSEIVLPGQPLVLPRGPVPQLGTGVYARGSDVRASLIGVPRHDGPKITISRIRPHPPSPN
TVVLGSVIRLTPLQAIIAISVVDGVPLPPGEEFTGVIRTQDVRATEKDKVKIGDCFRGGD
VVRGVVISLGDARSYFITTARNDLGVVFATSEAGATMQPVSWQEMRCPKTGKIEKRKCAK
PEGMP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaattgtgctccctggtcagccgctcgtgctcccccgcggaccagtcccccaa
ctcggtacgggcgtatatgcgaggggaagcgacgtccgcgcaagtctcatcggtgtcccc
cgccacgatggtccgaaaatcaccatctcacgcatcagaccacatcccccctccccaaac
accgttgtcctggggtccgtcatccgcctcacgccgctacaggctattatcgcgatctcg
gtcgtcgacggcgttcccctccctcctggcgaggagtttacgggtgttatccggacgcag
gacgtgcgcgcgacagagaaggacaaagtcaagatcggcgactgctttcgtgggggcgat
gtcgtccgtggtgttgttatctcccttggcgatgcgcgcagctatttcatcacgaccgcg
agaaacgatctcggtgttgtattcgctacgagcgaagcaggtgccaccatgcaacccgtc
tcctggcaagaaatgcgctgtccgaaaacaggaaaaatcgaaaagcgcaagtgcgcaaag
ccagaaggcatgccataa
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